DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SPSSGE
Uniprot ID:
Q6ZV50
Source protein:
DNA-binding protein RFX8
Source gene:
RFX8
Class:
DEG_Kelch_Keap1_1
Location:
8:13
E3 ligase:
KEAP1
DEGRON score:
0.8762
ASA_SCORE:
80.8333
COIL:
0.9332
CONS_SCORE:
0.3578
DSS_SCORE:
0.6504
HELIX:
0.046
FCONS_SCORE:
0.7587
RIG_SCORE:
0.5439
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E7D
TCGA-F5-6814
READ
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.3056
p.E7D
DO36556
READ
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.3056
p.V6M
DO222782
COCA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.S20R
DO229036
LICA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1389
p.A2T
DO38404
STAD
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1667
p.V6L
SIDM00120
Prostate Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.V6L
DU-145
prostate
COSMIC
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.T8N
SIDM00731
Small Cell Lung Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.7055
p.T8N
NCI-H2196
lung
COSMIC
SPSSGE
DEG_Kelch_Keap1_1
0.7055
p.P19L
SIDM00849
Kidney Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.1667
p.P19L
SIDM00672
Hepatocellular Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.1667
p.P19L
SIDM00793
Burkitt's Lymphoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.1667
p.P19L
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.1667
p.P19L
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.1667
p.P18L
ACH-000670
Lung Cancer
CCLE
SPSSGE
DEG_Kelch_Keap1_1
0.1944
Drug responses associated with RFX8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MU46
Smoothelin-like protein 1
DEG_Kelch_Keap1_1
320:325
SPSSGE
KEAP1
0.8915
More...
O15457
MutS protein homolog 4
DEG_Kelch_Keap1_1
17:22
SPSSGE
KEAP1
0.9846
More...
O60292
Signal-induced proliferation-associated 1-like protein 3
DEG_Kelch_Keap1_1
451:456
SPSSGE
KEAP1
0.9304
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_Kelch_Keap1_1
717:722
SPSSGE
KEAP1
0.9938
More...
Q9UIF9
Bromodomain adjacent to zinc finger domain protein 2A
DEG_Kelch_Keap1_1
26:31
SPSSGE
KEAP1
0.9651
More...
Q6ZV50
DNA-binding protein RFX8
DEG_Kelch_Keap1_1
8:13
SPSSGE
KEAP1
0.8762
More...