DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SPSSGE
Uniprot ID:
Q6WKZ4
Source protein:
Rab11 family-interacting protein 1
Source gene:
RAB11FIP1
Class:
DEG_Kelch_Keap1_1
Location:
717:722
E3 ligase:
KEAP1
DEGRON score:
0.9938
ASA_SCORE:
74.85
COIL:
0.8425
CONS_SCORE:
0.2798
DSS_SCORE:
0.5663
HELIX:
0.1352
FCONS_SCORE:
1.0668
RIG_SCORE:
0.599
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P727S
TCGA-2W-A8YY
CESC
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.1944
p.P727S
DO223732
CESC
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1944
p.Q714L
TCGA-86-A4JF
LUAD
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.25
p.Q714L
DO45317
LUAD
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.25
p.P707Q
TCGA-ER-A2NH
SKCM
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.P707Q
DO47683
SKCM
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.Q724K
DO228974
LICA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.L730I
DO229026
LICA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1111
p.P710S
DO27943
ORCA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1389
p.P707L
DO33128
PACA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.P707L
SIDM00210
Ovarian Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.0556
Drug responses associated with RAB11FIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MU46
Smoothelin-like protein 1
DEG_Kelch_Keap1_1
320:325
SPSSGE
KEAP1
0.8915
More...
O15457
MutS protein homolog 4
DEG_Kelch_Keap1_1
17:22
SPSSGE
KEAP1
0.9846
More...
O60292
Signal-induced proliferation-associated 1-like protein 3
DEG_Kelch_Keap1_1
451:456
SPSSGE
KEAP1
0.9304
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_Kelch_Keap1_1
717:722
SPSSGE
KEAP1
0.9938
More...
Q9UIF9
Bromodomain adjacent to zinc finger domain protein 2A
DEG_Kelch_Keap1_1
26:31
SPSSGE
KEAP1
0.9651
More...
Q6ZV50
DNA-binding protein RFX8
DEG_Kelch_Keap1_1
8:13
SPSSGE
KEAP1
0.8762
More...