DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VDSST
Uniprot ID:
Q13615
Source protein:
Myotubularin-related protein 3
Source gene:
MTMR3
Class:
DEG_SPOP_SBC_1
Location:
842:846
E3 ligase:
SPOP
DEGRON score:
0.9926
ASA_SCORE:
74.94
COIL:
0.8004
CONS_SCORE:
0.3069
DSS_SCORE:
0.564
HELIX:
0.1586
FCONS_SCORE:
1.0436
RIG_SCORE:
0.6993
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E836K
TCGA-18-5595
LUSC
TCGA
VDSST
DEG_SPOP_SBC_1
0.1667
p.R838G
TCGA-85-6561
LUSC
TCGA
VDSST
DEG_SPOP_SBC_1
0.2222
p.V842M
TCGA-L5-A4OW
ESCA
TCGA
VDSST
DEG_SPOP_SBC_1
0.7208
p.R836C
DO51948
BLCA
ICGC
VDSST
DEG_SPOP_SBC_1
0.1667
p.R836C
DO37421
SKCM
ICGC
VDSST
DEG_SPOP_SBC_1
0.1667
p.R836C
DO41644
UCEC
ICGC
VDSST
DEG_SPOP_SBC_1
0.1667
p.R836H
DO8842
COAD
ICGC
VDSST
DEG_SPOP_SBC_1
0.1667
p.S839F
DO233088
GACA
ICGC
VDSST
DEG_SPOP_SBC_1
0.25
p.S835R
DO42568
UCEC
ICGC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D832V
DO41392
UCEC
ICGC
VDSST
DEG_SPOP_SBC_1
0.0556
p.H855Y
ACH-000127
Bladder Cancer
CCLE
VDSST
DEG_SPOP_SBC_1
0.1944
p.M841V
ACH-000964
Leukemia
CCLE
VDSST
DEG_SPOP_SBC_1
0.3056
p.A840V
ACH-000984
Endometrial/Uterine Cancer
CCLE
VDSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with MTMR3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13615
Myotubularin-related protein 3
DEG_SPOP_SBC_1
842:846
VDSST
SPOP
0.9926
More...
Q14517
Protocadherin Fat 1
DEG_SPOP_SBC_1
2335:2339
VDSST
SPOP
0.9382
More...
Q92619
Rho GTPase-activating protein 45 [Cleaved into: Minor histocompatibility antigen HA-1
DEG_SPOP_SBC_1
226:230
VDSST
SPOP
0.9874
More...
Q96K83
Zinc finger protein 521
DEG_SPOP_SBC_1
365:369
VDSST
SPOP
0.5207
More...
Q9BQE9
B-cell CLL/lymphoma 7 protein family member B
DEG_SPOP_SBC_1
105:109
VDSST
SPOP
0.9379
More...
Q6IEE7
Transmembrane protein 132E
DEG_SPOP_SBC_1
643:647
VDSST
SPOP
0.8527
More...