DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VDSST
Uniprot ID:
Q6IEE7
Source protein:
Transmembrane protein 132E
Source gene:
TMEM132E
Class:
DEG_SPOP_SBC_1
Location:
643:647
E3 ligase:
SPOP
DEGRON score:
0.8527
ASA_SCORE:
62.78
COIL:
0.589
CONS_SCORE:
0.8565
DSS_SCORE:
0.4085
HELIX:
0.025
FCONS_SCORE:
1.0876
RIG_SCORE:
0.7754
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y643C
TCGA-17-Z050
LUAD
TCGA
VDSST
DEG_SPOP_SBC_1
0.7087
p.S642C
TCGA-85-8479
LUSC
TCGA
VDSST
DEG_SPOP_SBC_1
0.3056
p.S642C
DO45443
LUSC
ICGC
VDSST
DEG_SPOP_SBC_1
0.3056
p.P656S
TCGA-90-A4EE
LUSC
TCGA
VDSST
DEG_SPOP_SBC_1
0.0833
p.P656S
DO45513
LUSC
ICGC
VDSST
DEG_SPOP_SBC_1
0.0833
p.S642P
TCGA-AA-3949
COAD
TCGA
VDSST
DEG_SPOP_SBC_1
0.3056
p.S642P
DO7798
COAD
ICGC
VDSST
DEG_SPOP_SBC_1
0.3056
p.G646D
TCGA-B7-5816
STAD
TCGA
VDSST
DEG_SPOP_SBC_1
0.7198
p.G646D
DO38599
STAD
ICGC
VDSST
DEG_SPOP_SBC_1
0.7198
p.L636I
TCGA-NJ-A4YQ
LUAD
TCGA
VDSST
DEG_SPOP_SBC_1
0.1389
p.L636I
DO218944
LUAD
ICGC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D636N
SIDM00282
Colorectal Carcinoma
GDSC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D636N
SIDM00965
Small Cell Lung Carcinoma
GDSC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D636N
SIDM00052
Esophageal Squamous Cell Carcinoma
GDSC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D636N
HCE-4
oesophagus
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D636N
CW-2
large_intestine
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1389
p.D636N
NCI-H446
lung
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1389
p.L651H
ACH-000990
Endometrial/Uterine Cancer
CCLE
VDSST
DEG_SPOP_SBC_1
0.2222
Drug responses associated with TMEM132E mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13615
Myotubularin-related protein 3
DEG_SPOP_SBC_1
842:846
VDSST
SPOP
0.9926
More...
Q14517
Protocadherin Fat 1
DEG_SPOP_SBC_1
2335:2339
VDSST
SPOP
0.9382
More...
Q92619
Rho GTPase-activating protein 45 [Cleaved into: Minor histocompatibility antigen HA-1
DEG_SPOP_SBC_1
226:230
VDSST
SPOP
0.9874
More...
Q96K83
Zinc finger protein 521
DEG_SPOP_SBC_1
365:369
VDSST
SPOP
0.5207
More...
Q9BQE9
B-cell CLL/lymphoma 7 protein family member B
DEG_SPOP_SBC_1
105:109
VDSST
SPOP
0.9379
More...
Q6IEE7
Transmembrane protein 132E
DEG_SPOP_SBC_1
643:647
VDSST
SPOP
0.8527
More...