DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VDSST
Uniprot ID:
Q92619
Source protein:
Rho GTPase-activating protein 45 [Cleaved into: Minor histocompatibility antigen HA-1
Source gene:
ARHGAP45
Class:
DEG_SPOP_SBC_1
Location:
226:230
E3 ligase:
SPOP
DEGRON score:
0.9874
ASA_SCORE:
68.74
COIL:
0.8288
CONS_SCORE:
0.286
DSS_SCORE:
0.3837
HELIX:
0.143
FCONS_SCORE:
0.9009
RIG_SCORE:
0.7797
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T225M
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VDSST
DEG_SPOP_SBC_1
0.3056
p.I226T
SIDM01150
Non-Small Cell Lung Carcinoma
GDSC
VDSST
DEG_SPOP_SBC_1
0.7078
p.I226T
NCI-H838
lung
COSMIC
VDSST
DEG_SPOP_SBC_1
0.7078
p.V216M
NCI-H847
lung
COSMIC
VDSST
DEG_SPOP_SBC_1
0.0556
p.D230N
NCI-H1944
lung
COSMIC
VDSST
DEG_SPOP_SBC_1
0.6932
p.A220V
SNU-175
large_intestine
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1667
p.A220V
HCT-116
large_intestine
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1667
p.R221W
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1944
p.I237T
NCI-H838
lung
COSMIC
VDSST
DEG_SPOP_SBC_1
0.1389
p.G233E
NCI-H510A
lung
COSMIC
VDSST
DEG_SPOP_SBC_1
0.25
Drug responses associated with ARHGAP45 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13615
Myotubularin-related protein 3
DEG_SPOP_SBC_1
842:846
VDSST
SPOP
0.9926
More...
Q14517
Protocadherin Fat 1
DEG_SPOP_SBC_1
2335:2339
VDSST
SPOP
0.9382
More...
Q92619
Rho GTPase-activating protein 45 [Cleaved into: Minor histocompatibility antigen HA-1
DEG_SPOP_SBC_1
226:230
VDSST
SPOP
0.9874
More...
Q96K83
Zinc finger protein 521
DEG_SPOP_SBC_1
365:369
VDSST
SPOP
0.5207
More...
Q9BQE9
B-cell CLL/lymphoma 7 protein family member B
DEG_SPOP_SBC_1
105:109
VDSST
SPOP
0.9379
More...
Q6IEE7
Transmembrane protein 132E
DEG_SPOP_SBC_1
643:647
VDSST
SPOP
0.8527
More...