DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGSST
Uniprot ID:
P38398
Source protein:
Breast cancer type 1 susceptibility protein
Source gene:
BRCA1
Class:
DEG_SPOP_SBC_1
Location:
1047:1051
E3 ligase:
SPOP
DEGRON score:
0.9839
ASA_SCORE:
76.34
COIL:
0.9022
CONS_SCORE:
0.3633
DSS_SCORE:
0.5192
HELIX:
0.055
FCONS_SCORE:
1.0413
RIG_SCORE:
0.6413
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1051I
DO1285
BRCA
ICGC
VGSST
DEG_SPOP_SBC_1
0.7174
p.V1046I
DO231663
LINC
ICGC
VGSST
DEG_SPOP_SBC_1
0.3056
p.G1053R
DO36531
READ
ICGC
VGSST
DEG_SPOP_SBC_1
0.2778
p.L1037F
DO41331
UCEC
ICGC
VGSST
DEG_SPOP_SBC_1
0.1667
p.S1054R
DO41379
UCEC
ICGC
VGSST
DEG_SPOP_SBC_1
0.25
p.I1044V
SIDM00317
Kidney Carcinoma
GDSC
VGSST
DEG_SPOP_SBC_1
0.25
p.I1044V
ACH-000171
Kidney Cancer
CCLE
VGSST
DEG_SPOP_SBC_1
0.25
p.I1044V
VMRC-RCZ
kidney
COSMIC
VGSST
DEG_SPOP_SBC_1
0.25
p.I1058V
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
VGSST
DEG_SPOP_SBC_1
0.1389
p.I1058V
ACH-000823
Esophageal Cancer
CCLE
VGSST
DEG_SPOP_SBC_1
0.1389
p.I1058V
KYSE-140
oesophagus
COSMIC
VGSST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with BRCA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1047:1051
VGSST
SPOP
0.9839
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
489:493
VGSST
SPOP
0.7416
More...
Q96EB6
NAD-dependent protein deacetylase sirtuin-1
DEG_SPOP_SBC_1
603:607
VGSST
SPOP
0.9489
More...
Q9BSJ2
Gamma-tubulin complex component 2
DEG_SPOP_SBC_1
113:117
VGSST
SPOP
0.7675
More...
Q9NZ56
Formin-2
DEG_SPOP_SBC_1
1249:1253
VGSST
SPOP
0.9636
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
414:418
VGSST
SPOP
0.9984
More...