DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VGSST
Uniprot ID:
Q15032
Source protein:
R3H domain-containing protein 1
Source gene:
R3HDM1
Class:
DEG_SPOP_SBC_1
Location:
414:418
E3 ligase:
SPOP
DEGRON score:
0.9984
ASA_SCORE:
71.12
COIL:
0.9142
CONS_SCORE:
0.4517
DSS_SCORE:
0.6217
HELIX:
0.0324
FCONS_SCORE:
1.0832
RIG_SCORE:
0.5368
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G419D
TCGA-2W-A8YY
CESC
TCGA
VGSST
DEG_SPOP_SBC_1
0.3056
p.L421V
TCGA-CR-6473
HNSC
TCGA
VGSST
DEG_SPOP_SBC_1
0.25
p.T418A
TCGA-FI-A2D5
UCEC
TCGA
VGSST
DEG_SPOP_SBC_1
0.7139
p.G405E
DO234319
ESAD
ICGC
VGSST
DEG_SPOP_SBC_1
0.1944
p.Q406H
DO49761
KIRP
ICGC
VGSST
DEG_SPOP_SBC_1
0.1111
p.V407F
DO228971
LICA
ICGC
VGSST
DEG_SPOP_SBC_1
0.1389
p.G427C
DO26468
LUSC
ICGC
VGSST
DEG_SPOP_SBC_1
0.0833
p.A421V
DO47717
STAD
ICGC
VGSST
DEG_SPOP_SBC_1
0.25
p.F414L
DO40884
UCEC
ICGC
VGSST
DEG_SPOP_SBC_1
0.6981
p.R427H
SNU-C5
large_intestine
COSMIC
VGSST
DEG_SPOP_SBC_1
0.0833
p.P418S
KYSE-150
oesophagus
COSMIC
VGSST
DEG_SPOP_SBC_1
0.6752
Drug responses associated with R3HDM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1047:1051
VGSST
SPOP
0.9839
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
489:493
VGSST
SPOP
0.7416
More...
Q96EB6
NAD-dependent protein deacetylase sirtuin-1
DEG_SPOP_SBC_1
603:607
VGSST
SPOP
0.9489
More...
Q9BSJ2
Gamma-tubulin complex component 2
DEG_SPOP_SBC_1
113:117
VGSST
SPOP
0.7675
More...
Q9NZ56
Formin-2
DEG_SPOP_SBC_1
1249:1253
VGSST
SPOP
0.9636
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
414:418
VGSST
SPOP
0.9984
More...