DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
VGSST
Uniprot ID:
Q96EB6
Source protein:
NAD-dependent protein deacetylase sirtuin-1
Source gene:
SIRT1
Class:
DEG_SPOP_SBC_1
Location:
603:607
E3 ligase:
SPOP
DEGRON score:
0.9489
ASA_SCORE:
77.94
COIL:
0.8972
CONS_SCORE:
0.261
DSS_SCORE:
0.6658
HELIX:
0.0544
FCONS_SCORE:
0.9358
RIG_SCORE:
0.6164
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A617V
TCGA-AA-3672
COAD
TCGA
VGSST
DEG_SPOP_SBC_1
0.0556
p.E609A
TCGA-XF-A9T0
BLCA
TCGA
VGSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with SIRT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00841
COREAD|large_intestine
p.V383I (No)
GDSC
Selisistat
234.3646
SIDM00951
LAML|acute_myeloid_leukaemia
p.L478V (No)
GDSC
Selisistat
77.29
SIDM00782
COREAD|large_intestine
p.D379N (No)
GDSC
Selisistat
339.5601
SIDM01007
ALL|lymphoblastic_leukemia
p.I256fs*2 (No)
GDSC
Selisistat
87.1222
SIDM00145
ALL|lymphoblastic_leukemia
p.F414fs*13 (No)
GDSC
Selisistat
125.1844
SIDM00619
THCA|thyroid
p.G355V (No)
GDSC
Selisistat
79.5472
SIDM00770
SCLC|lung_small_cell_carcinoma
p.G495D (No)
GDSC
Selisistat
367.6381
SIDM00304
OV|ovary
p.S324fs*8 (No)
GDSC
Selisistat
447.8266
SIDM00602
STAD|stomach
p.R237fs*11 (No)
GDSC
Selisistat
298.1516
SIDM00783
COREAD|large_intestine
p.I256fs*2 (No)
GDSC
Selisistat
142.6314
SIDM00898
BRCA|breast
p.T177I (No)
GDSC
Selisistat
287.6047
SIDM00685
GBM|glioma
p.P393R (No)
GDSC
Selisistat
131.2062
SIDM00150
COREAD|large_intestine
p.M407T (No)
GDSC
Selisistat
170.1144
SIDM00375
HNSC|head_and_neck
p.A712T (No)
GDSC
Selisistat
325.9115
SIDM00789
COREAD|large_intestine
p.R181W (No)
GDSC
Selisistat
198.5977
SIDM01154
ALL|lymphoblastic_T_cell_leukaemia
p.F414fs*13 (No)
GDSC
Selisistat
112.6936
SIDM00895
DLBC|B_cell_lymphoma
p.S668F (No)
GDSC
Selisistat
124.056
SIDM01081
HNSC|head_and_neck
p.I270K (No)
GDSC
Selisistat
292.294
SIDM00299
UNCLASSIFIED|soft_tissue_other
p.A712T (No)
GDSC
Selisistat
332.9169
SIDM00447
UNCLASSIFIED|B_cell_leukemia
p.R649H (No)
GDSC
Selisistat
156.663
SIDM00193
COREAD|large_intestine
p.K238T (No)
GDSC
Selisistat
474.4698
SIDM00193
COREAD|large_intestine
p.E725G (No)
GDSC
Selisistat
474.4698
SIDM00118
COREAD|large_intestine
p.E520* (No)
GDSC
Selisistat
256.5652
SIDM00118
COREAD|large_intestine
p.E687K (No)
GDSC
Selisistat
256.5652
All proteins holding degron of VGSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1047:1051
VGSST
SPOP
0.9839
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
489:493
VGSST
SPOP
0.7416
More...
Q96EB6
NAD-dependent protein deacetylase sirtuin-1
DEG_SPOP_SBC_1
603:607
VGSST
SPOP
0.9489
More...
Q9BSJ2
Gamma-tubulin complex component 2
DEG_SPOP_SBC_1
113:117
VGSST
SPOP
0.7675
More...
Q9NZ56
Formin-2
DEG_SPOP_SBC_1
1249:1253
VGSST
SPOP
0.9636
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
414:418
VGSST
SPOP
0.9984
More...