DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGSST
Uniprot ID:
Q9BSJ2
Source protein:
Gamma-tubulin complex component 2
Source gene:
TUBGCP2
Class:
DEG_SPOP_SBC_1
Location:
113:117
E3 ligase:
SPOP
DEGRON score:
0.7675
ASA_SCORE:
80.92
COIL:
0.8994
CONS_SCORE:
0.2798
DSS_SCORE:
0.3211
HELIX:
0.087
FCONS_SCORE:
0.982
RIG_SCORE:
0.6566
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A124G
TCGA-AJ-A3EK
UCEC
TCGA
VGSST
DEG_SPOP_SBC_1
0.1389
p.A124G
DO41584
UCEC
ICGC
VGSST
DEG_SPOP_SBC_1
0.1389
p.K103T
TCGA-AP-A059
UCEC
TCGA
VGSST
DEG_SPOP_SBC_1
0.5
p.K103T
DO41361
UCEC
ICGC
VGSST
DEG_SPOP_SBC_1
0.5
p.A110G
TCGA-S3-AA12
BRCA
TCGA
VGSST
DEG_SPOP_SBC_1
0.25
p.A110G
DO51224
BRCA
ICGC
VGSST
DEG_SPOP_SBC_1
0.25
p.S115N
TCGA-UF-A71A
HNSC
TCGA
VGSST
DEG_SPOP_SBC_1
0.7069
p.S115N
DO52106
HNSC
ICGC
VGSST
DEG_SPOP_SBC_1
0.7069
p.S119G
DO225005
BRCA
ICGC
VGSST
DEG_SPOP_SBC_1
0.2778
p.A112V
DO229248
THCA
ICGC
VGSST
DEG_SPOP_SBC_1
0.3056
p.R114L
NCI-H322M
lung
COSMIC
VGSST
DEG_SPOP_SBC_1
0.8428
Drug responses associated with TUBGCP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1047:1051
VGSST
SPOP
0.9839
More...
Q02930
Cyclic AMP-responsive element-binding protein 5
DEG_SPOP_SBC_1
489:493
VGSST
SPOP
0.7416
More...
Q96EB6
NAD-dependent protein deacetylase sirtuin-1
DEG_SPOP_SBC_1
603:607
VGSST
SPOP
0.9489
More...
Q9BSJ2
Gamma-tubulin complex component 2
DEG_SPOP_SBC_1
113:117
VGSST
SPOP
0.7675
More...
Q9NZ56
Formin-2
DEG_SPOP_SBC_1
1249:1253
VGSST
SPOP
0.9636
More...
Q15032
R3H domain-containing protein 1
DEG_SPOP_SBC_1
414:418
VGSST
SPOP
0.9984
More...