DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRSTS
Uniprot ID:
O60941
Source protein:
Dystrobrevin beta
Source gene:
DTNB
Class:
DEG_SPOP_SBC_1
Location:
548:552
E3 ligase:
SPOP
DEGRON score:
0.7802
ASA_SCORE:
86.96
COIL:
0.8646
CONS_SCORE:
0.349
DSS_SCORE:
0.7871
HELIX:
0.0354
FCONS_SCORE:
0.8495
RIG_SCORE:
0.6006
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G541S
TCGA-A6-6781
COAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1389
p.G541S
DO8447
COAD
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1389
p.S552P
TCGA-AN-A0FY
BRCA
TCGA
VRSTS
DEG_SPOP_SBC_1
0.7863
p.S552P
DO2108
BRCA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7863
p.S552P
ACH-001410
Bladder Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.7863
p.G541C
TCGA-EE-A20F
SKCM
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1389
p.R542Q
TCGA-HF-7132
STAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1667
p.R542Q
DO38214
STAD
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1667
p.V542M
DO222397
BTCA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1667
p.E558D
DO222616
ESCA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1667
p.A553E
DO229045
LICA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.E550G
DO44978
LIHC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7199
p.E551K
DO25867
LUAD
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7022
p.A547T
DO41746
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.N560S
DO41331
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1111
p.P543A
SIDM00718
Non-Small Cell Lung Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.1944
p.P543A
ACH-000860
Lung Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.1944
p.T558P
ACH-002371
Non-Cancerous
CCLE
VRSTS
DEG_SPOP_SBC_1
0.1667
p.T549P
H3255
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.7031
p.T549P
CAKI-1
kidney
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.7031
p.V539M
NCI-H727
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.0833
p.T556P
H3255
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.6667
p.T556P
CAKI-1
kidney
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.6667
p.R559K
NCI-H2087
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with DTNB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60941
Dystrobrevin beta
DEG_SPOP_SBC_1
548:552
VRSTS
SPOP
0.7802
More...
O95696
Bromodomain-containing protein 1
DEG_SPOP_SBC_1
420:424
VRSTS
SPOP
0.9741
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
1748:1752
VRSTS
SPOP
0.8843
More...
Q7Z6J6
FERM domain-containing protein 5
DEG_SPOP_SBC_1
392:396
VRSTS
SPOP
0.8657
More...
Q9P202
Whirlin
DEG_SPOP_SBC_1
569:573
VRSTS
SPOP
0.9813
More...
Q5VZP5
Serine/threonine/tyrosine-interacting-like protein 2
DEG_SPOP_SBC_1
1001:1005
VRSTS
SPOP
0.8835
More...