DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRSTS
Uniprot ID:
P12270
Source protein:
Nucleoprotein TPR
Source gene:
TPR
Class:
DEG_SPOP_SBC_1
Location:
1748:1752
E3 ligase:
SPOP
DEGRON score:
0.8843
ASA_SCORE:
98.72
COIL:
0.9096
CONS_SCORE:
0.3886
DSS_SCORE:
0.6043
HELIX:
0.0192
FCONS_SCORE:
0.7651
RIG_SCORE:
0.6208
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1749C
TCGA-AP-A0LM
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
TCGA-AP-A1DV
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
TCGA-D1-A17Q
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
TCGA-D3-A8GM
SKCM
TCGA
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
DO50288
SKCM
ICGC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
DO43306
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
DO43186
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
DO41903
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
SIDM01043
Other Sarcomas
GDSC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
ACH-000913
Endometrial/Uterine Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.719
p.R1749C
ESS-1
endometrium
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.719
p.S1760Y
TCGA-DF-A2KU
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1111
p.S1760Y
DO223286
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1111
p.P1753S
TCGA-DF-A2KU
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.3056
p.P1753S
DO223286
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.S1745G
TCGA-UF-A7JA
HNSC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.25
p.S1745G
DO52112
HNSC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.25
p.R1749H
DO233652
GACA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R1749H
DO229075
PRAD
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R1749H
DO229459
SKCA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.S1743R
DO229037
LICA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1944
p.S1758F
SIDM00708
Non-Small Cell Lung Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.1667
p.S1758F
ACH-000841
Lung Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.1667
p.S1758F
NCI-H2087
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.1667
p.V1748I
SIDM00151
Ovarian Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.7076
p.R1749S
SIDM00850
Gastric Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.6316
p.R1749S
ACH-000880
Gastric Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.6316
p.R1749S
AGS
stomach
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.6316
p.I1759V
ACH-000829
Myeloma
CCLE
VRSTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with TPR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60941
Dystrobrevin beta
DEG_SPOP_SBC_1
548:552
VRSTS
SPOP
0.7802
More...
O95696
Bromodomain-containing protein 1
DEG_SPOP_SBC_1
420:424
VRSTS
SPOP
0.9741
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
1748:1752
VRSTS
SPOP
0.8843
More...
Q7Z6J6
FERM domain-containing protein 5
DEG_SPOP_SBC_1
392:396
VRSTS
SPOP
0.8657
More...
Q9P202
Whirlin
DEG_SPOP_SBC_1
569:573
VRSTS
SPOP
0.9813
More...
Q5VZP5
Serine/threonine/tyrosine-interacting-like protein 2
DEG_SPOP_SBC_1
1001:1005
VRSTS
SPOP
0.8835
More...