DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRSTS
Uniprot ID:
Q7Z6J6
Source protein:
FERM domain-containing protein 5
Source gene:
FRMD5
Class:
DEG_SPOP_SBC_1
Location:
392:396
E3 ligase:
SPOP
DEGRON score:
0.8657
ASA_SCORE:
90.8
COIL:
0.8328
CONS_SCORE:
0.348
DSS_SCORE:
0.586
HELIX:
0.0402
FCONS_SCORE:
1.0984
RIG_SCORE:
0.5979
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R393C
TCGA-A5-A1OF
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
SIDM00789
Colorectal Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
ACH-000997
Colon/Colorectal Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
ACH-001061
Colon/Colorectal Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
HCT-15
large_intestine
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393H
TCGA-EA-A3HS
CESC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R393H
SIDM01001
Breast Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R393H
ACH-000258
Breast Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R393H
DU-4475
breast
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.E396K
DO36467
READ
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7022
p.T395S
SIDM01519
Head and Neck Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.6005
p.E397K
DO6269
CESC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.E397K
DO51254
SKCM
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.G398R
TCGA-YL-A8SJ
PRAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.2778
p.S389Y
TCGA-A8-A08G
BRCA
TCGA
VRSTS
DEG_SPOP_SBC_1
0.25
p.D399A
ACH-000448
Lung Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.25
p.D399A
NCI-H1666
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.25
p.A400E
DO229046
LICA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.2222
p.R384W
TCGA-AM-5821
COAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1111
Showing 1 to 19 of 19 entries
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Drug responses associated with FRMD5 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VRSTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95696
Bromodomain-containing protein 1
DEG_SPOP_SBC_1
420:424
VRSTS
SPOP
0.9741
More...
O60941
Dystrobrevin beta
DEG_SPOP_SBC_1
548:552
VRSTS
SPOP
0.7802
More...
Q7Z6J6
FERM domain-containing protein 5
DEG_SPOP_SBC_1
392:396
VRSTS
SPOP
0.8657
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
1748:1752
VRSTS
SPOP
0.8843
More...
Q5VZP5
Serine/threonine/tyrosine-interacting-like protein 2
DEG_SPOP_SBC_1
1001:1005
VRSTS
SPOP
0.8835
More...
Q9P202
Whirlin
DEG_SPOP_SBC_1
569:573
VRSTS
SPOP
0.9813
More...
Showing 1 to 6 of 6 entries
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