DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRSTS
Uniprot ID:
Q7Z6J6
Source protein:
FERM domain-containing protein 5
Source gene:
FRMD5
Class:
DEG_SPOP_SBC_1
Location:
392:396
E3 ligase:
SPOP
DEGRON score:
0.8657
ASA_SCORE:
90.8
COIL:
0.8328
CONS_SCORE:
0.348
DSS_SCORE:
0.586
HELIX:
0.0402
FCONS_SCORE:
1.0984
RIG_SCORE:
0.5979
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R393C
TCGA-A5-A1OF
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
SIDM00789
Colorectal Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
ACH-000997
Colon/Colorectal Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
ACH-001061
Colon/Colorectal Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.719
p.R393C
HCT-15
large_intestine
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.719
p.S389Y
TCGA-A8-A08G
BRCA
TCGA
VRSTS
DEG_SPOP_SBC_1
0.25
p.R384W
TCGA-AM-5821
COAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1111
p.R393H
TCGA-EA-A3HS
CESC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R393H
SIDM01001
Breast Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R393H
ACH-000258
Breast Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.7133
p.R393H
DU-4475
breast
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.7133
p.G398R
TCGA-YL-A8SJ
PRAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.2778
p.E397K
DO6269
CESC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.E397K
DO51254
SKCM
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.A400E
DO229046
LICA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.2222
p.E396K
DO36467
READ
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7022
p.T395S
SIDM01519
Head and Neck Carcinoma
GDSC
VRSTS
DEG_SPOP_SBC_1
0.6005
p.D399A
ACH-000448
Lung Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.25
p.D399A
NCI-H1666
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with FRMD5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60941
Dystrobrevin beta
DEG_SPOP_SBC_1
548:552
VRSTS
SPOP
0.7802
More...
O95696
Bromodomain-containing protein 1
DEG_SPOP_SBC_1
420:424
VRSTS
SPOP
0.9741
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
1748:1752
VRSTS
SPOP
0.8843
More...
Q7Z6J6
FERM domain-containing protein 5
DEG_SPOP_SBC_1
392:396
VRSTS
SPOP
0.8657
More...
Q9P202
Whirlin
DEG_SPOP_SBC_1
569:573
VRSTS
SPOP
0.9813
More...
Q5VZP5
Serine/threonine/tyrosine-interacting-like protein 2
DEG_SPOP_SBC_1
1001:1005
VRSTS
SPOP
0.8835
More...