DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRSTS
Uniprot ID:
Q5VZP5
Source protein:
Serine/threonine/tyrosine-interacting-like protein 2
Source gene:
STYXL2
Class:
DEG_SPOP_SBC_1
Location:
1001:1005
E3 ligase:
SPOP
DEGRON score:
0.8835
ASA_SCORE:
71.46
COIL:
0.5044
CONS_SCORE:
0.4098
DSS_SCORE:
0.6016
HELIX:
0.145
FCONS_SCORE:
1.0547
RIG_SCORE:
0.6298
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1008L
TCGA-55-7994
LUAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.25
p.S1008L
DO45311
LUAD
ICGC
VRSTS
DEG_SPOP_SBC_1
0.25
p.F1007L
TCGA-AX-A05Z
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.2778
p.F1007L
TCGA-EO-A22R
UCEC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.2778
p.F1007L
DO40884
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.2778
p.F1007L
DO42713
UCEC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.2778
p.N999K
TCGA-D6-A74Q
HNSC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.2778
p.N999K
DO52087
HNSC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.2778
p.E1014K
TCGA-EB-A3XF
SKCM
TCGA
VRSTS
DEG_SPOP_SBC_1
0.0833
p.E1014K
DO37437
SKCM
ICGC
VRSTS
DEG_SPOP_SBC_1
0.0833
p.E1014K
ACH-002309
Sarcoma
CCLE
VRSTS
DEG_SPOP_SBC_1
0.0833
p.E1014K
SW684
soft_tissue
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.0833
p.G998S
TCGA-IB-7651
PAAD
TCGA
VRSTS
DEG_SPOP_SBC_1
0.25
p.G998S
DO46657
PAAD
ICGC
VRSTS
DEG_SPOP_SBC_1
0.25
p.E995Q
TCGA-JW-A5VL
CESC
TCGA
VRSTS
DEG_SPOP_SBC_1
0.1667
p.E995Q
DO49976
CESC
ICGC
VRSTS
DEG_SPOP_SBC_1
0.1667
p.R1006W
DO48200
ESCA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.S1003I
DO229032
LICA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.7341
p.G1015C
DO229045
LICA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.0556
p.S1000F
DO220841
MELA
ICGC
VRSTS
DEG_SPOP_SBC_1
0.3056
p.R1006Q
ACH-002171
Lung Cancer
CCLE
VRSTS
DEG_SPOP_SBC_1
0.3056
p.R1006Q
NCI-H250
lung
COSMIC
VRSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with STYXL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60941
Dystrobrevin beta
DEG_SPOP_SBC_1
548:552
VRSTS
SPOP
0.7802
More...
O95696
Bromodomain-containing protein 1
DEG_SPOP_SBC_1
420:424
VRSTS
SPOP
0.9741
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
1748:1752
VRSTS
SPOP
0.8843
More...
Q7Z6J6
FERM domain-containing protein 5
DEG_SPOP_SBC_1
392:396
VRSTS
SPOP
0.8657
More...
Q9P202
Whirlin
DEG_SPOP_SBC_1
569:573
VRSTS
SPOP
0.9813
More...
Q5VZP5
Serine/threonine/tyrosine-interacting-like protein 2
DEG_SPOP_SBC_1
1001:1005
VRSTS
SPOP
0.8835
More...