DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTTSS
Uniprot ID:
P54259
Source protein:
Atrophin-1
Source gene:
ATN1
Class:
DEG_SPOP_SBC_1
Location:
607:611
E3 ligase:
SPOP
DEGRON score:
0.9514
ASA_SCORE:
85.76
COIL:
0.9388
CONS_SCORE:
0.6049
DSS_SCORE:
0.4155
HELIX:
0.042
FCONS_SCORE:
0.9133
RIG_SCORE:
0.7274
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A597V
TCGA-AJ-A3BH
UCEC
TCGA
VTTSS
DEG_SPOP_SBC_1
0.0556
p.A597V
DO41638
UCEC
ICGC
VTTSS
DEG_SPOP_SBC_1
0.0556
p.P603L
TCGA-B5-A11E
UCEC
TCGA
VTTSS
DEG_SPOP_SBC_1
0.2222
p.P603L
DO222604
ESCA
ICGC
VTTSS
DEG_SPOP_SBC_1
0.2222
p.P603L
DO41644
UCEC
ICGC
VTTSS
DEG_SPOP_SBC_1
0.2222
p.Y599H
DO231704
LINC
ICGC
VTTSS
DEG_SPOP_SBC_1
0.1111
p.T609I
DO232224
PBCA
ICGC
VTTSS
DEG_SPOP_SBC_1
0.7078
p.V607I
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
VTTSS
DEG_SPOP_SBC_1
0.7076
p.V607I
ACH-000789
Lung Cancer
CCLE
VTTSS
DEG_SPOP_SBC_1
0.7076
p.V607I
NCI-H810
lung
COSMIC
VTTSS
DEG_SPOP_SBC_1
0.7076
Drug responses associated with ATN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22105
Tenascin-X
DEG_SPOP_SBC_1
3666:3670
VTTSS
SPOP
0.8858
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
607:611
VTTSS
SPOP
0.9514
More...
Q14119
Vascular endothelial zinc finger 1
DEG_SPOP_SBC_1
139:143
VTTSS
SPOP
0.7517
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
601:605
VTTSS
SPOP
0.6705
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
487:491
VTTSS
SPOP
0.994
More...
Q9UMX0
Ubiquilin-1
DEG_SPOP_SBC_1
127:131
VTTSS
SPOP
0.967
More...
Q16473
Putative tenascin-XA
DEG_SPOP_SBC_1
154:158
VTTSS
SPOP
0.8742
More...