DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTTSS
Uniprot ID:
Q14119
Source protein:
Vascular endothelial zinc finger 1
Source gene:
VEZF1
Class:
DEG_SPOP_SBC_1
Location:
139:143
E3 ligase:
SPOP
DEGRON score:
0.7517
ASA_SCORE:
70.92
COIL:
0.5236
CONS_SCORE:
0.5432
DSS_SCORE:
0.4228
HELIX:
0.0074
FCONS_SCORE:
1.138
RIG_SCORE:
0.687
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A133V
TCGA-G4-6588
COAD
TCGA
VTTSS
DEG_SPOP_SBC_1
0.1667
p.A133V
DO10140
COAD
ICGC
VTTSS
DEG_SPOP_SBC_1
0.1667
p.L136V
TCGA-YC-A89H
BLCA
TCGA
VTTSS
DEG_SPOP_SBC_1
0.25
p.L136V
DO51948
BLCA
ICGC
VTTSS
DEG_SPOP_SBC_1
0.25
p.V129I
SIDM00217
Colorectal Carcinoma
GDSC
VTTSS
DEG_SPOP_SBC_1
0.0556
p.V129I
ACH-000999
Colon/Colorectal Cancer
CCLE
VTTSS
DEG_SPOP_SBC_1
0.0556
p.V129I
SNU-1040
large_intestine
COSMIC
VTTSS
DEG_SPOP_SBC_1
0.0556
p.S130L
ACH-000973
Bladder Cancer
CCLE
VTTSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with VEZF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22105
Tenascin-X
DEG_SPOP_SBC_1
3666:3670
VTTSS
SPOP
0.8858
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
607:611
VTTSS
SPOP
0.9514
More...
Q14119
Vascular endothelial zinc finger 1
DEG_SPOP_SBC_1
139:143
VTTSS
SPOP
0.7517
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
601:605
VTTSS
SPOP
0.6705
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
487:491
VTTSS
SPOP
0.994
More...
Q9UMX0
Ubiquilin-1
DEG_SPOP_SBC_1
127:131
VTTSS
SPOP
0.967
More...
Q16473
Putative tenascin-XA
DEG_SPOP_SBC_1
154:158
VTTSS
SPOP
0.8742
More...