DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTTSS
Uniprot ID:
Q99081
Source protein:
Transcription factor 12
Source gene:
TCF12
Class:
DEG_SPOP_SBC_1
Location:
487:491
E3 ligase:
SPOP
DEGRON score:
0.994
ASA_SCORE:
83.28
COIL:
0.9168
CONS_SCORE:
0.3852
DSS_SCORE:
0.5617
HELIX:
0.041
FCONS_SCORE:
1.1623
RIG_SCORE:
0.6964
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L480F
TCGA-2W-A8YY
CESC
TCGA
VTTSS
DEG_SPOP_SBC_1
0.1389
p.R494W
TCGA-AA-A022
COAD
TCGA
VTTSS
DEG_SPOP_SBC_1
0.25
p.S488L
TCGA-D3-A8GI
SKCM
TCGA
VTTSS
DEG_SPOP_SBC_1
0.7667
p.R494L
TCGA-EE-A184
SKCM
TCGA
VTTSS
DEG_SPOP_SBC_1
0.25
p.R489I
DO18056
KIRC
ICGC
VTTSS
DEG_SPOP_SBC_1
0.8102
p.A479V
DO41752
UCEC
ICGC
VTTSS
DEG_SPOP_SBC_1
0.1111
p.A479V
CW-2
large_intestine
COSMIC
VTTSS
DEG_SPOP_SBC_1
0.1111
p.N492Y
NCI-H64
lung
COSMIC
VTTSS
DEG_SPOP_SBC_1
0.3056
p.N492Y
NCI-H1436
lung
COSMIC
VTTSS
DEG_SPOP_SBC_1
0.3056
p.N495K
HDQ-P1
breast
COSMIC
VTTSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with TCF12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22105
Tenascin-X
DEG_SPOP_SBC_1
3666:3670
VTTSS
SPOP
0.8858
More...
P54259
Atrophin-1
DEG_SPOP_SBC_1
607:611
VTTSS
SPOP
0.9514
More...
Q14119
Vascular endothelial zinc finger 1
DEG_SPOP_SBC_1
139:143
VTTSS
SPOP
0.7517
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
601:605
VTTSS
SPOP
0.6705
More...
Q99081
Transcription factor 12
DEG_SPOP_SBC_1
487:491
VTTSS
SPOP
0.994
More...
Q9UMX0
Ubiquilin-1
DEG_SPOP_SBC_1
127:131
VTTSS
SPOP
0.967
More...
Q16473
Putative tenascin-XA
DEG_SPOP_SBC_1
154:158
VTTSS
SPOP
0.8742
More...