DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTTTS
Uniprot ID:
Q96FS4
Source protein:
Signal-induced proliferation-associated protein 1
Source gene:
SIPA1
Class:
DEG_SPOP_SBC_1
Location:
544:548
E3 ligase:
SPOP
DEGRON score:
0.9169
ASA_SCORE:
69.44
COIL:
0.7504
CONS_SCORE:
0.3061
DSS_SCORE:
0.4368
HELIX:
0.1884
FCONS_SCORE:
0.779
RIG_SCORE:
0.7829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L536Q
TCGA-DD-AAD1
LIHC
TCGA
VTTTS
DEG_SPOP_SBC_1
0.1111
p.L536Q
DO52218
LIHC
ICGC
VTTTS
DEG_SPOP_SBC_1
0.1111
p.T547K
DO229208
THCA
ICGC
VTTTS
DEG_SPOP_SBC_1
0.7306
p.N542K
SIDM00965
Small Cell Lung Carcinoma
GDSC
VTTTS
DEG_SPOP_SBC_1
0.2778
p.N542K
ACH-000800
Lung Cancer
CCLE
VTTTS
DEG_SPOP_SBC_1
0.2778
p.T547A
ACH-000940
Endometrial/Uterine Cancer
CCLE
VTTTS
DEG_SPOP_SBC_1
0.7139
Drug responses associated with SIPA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13646
Keratin, type I cytoskeletal 13
DEG_SPOP_SBC_1
433:437
VTTTS
SPOP
0.9542
More...
P13646
Keratin, type I cytoskeletal 13
DEG_SPOP_SBC_1
441:445
VTTTS
SPOP
0.8837
More...
P31629
Transcription factor HIVEP2
DEG_SPOP_SBC_1
440:444
VTTTS
SPOP
0.9813
More...
Q13469
Nuclear factor of activated T-cells, cytoplasmic 2
DEG_SPOP_SBC_1
484:488
VTTTS
SPOP
0.5226
More...
Q96FS4
Signal-induced proliferation-associated protein 1
DEG_SPOP_SBC_1
544:548
VTTTS
SPOP
0.9169
More...
Q9NYZ4
Sialic acid-binding Ig-like lectin 8
DEG_SPOP_SBC_1
233:237
VTTTS
SPOP
0.8068
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
1283:1287
VTTTS
SPOP
0.5985
More...