The pahtway p4719 has 275 genes in the original annotation. Currently, there are 148 genes in SZGR (with evidence in schizophrenia) that are present at this pathway.
|
Gene ID |
Symbol |
Synonyms |
Official Full Name |
Start Site |
End Site |
Location |
9806 | SPOCK2 | testican-2 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 | | | 10pter-q25.3 |
9211 | LGI1 | ADLTE | ADPAEF | ADPEAF | EPITEMPIN | EPT | ETL1 | IB1099 | leucine-rich, glioma inactivated 1 | | | 10q24 |
1308 | COL17A1 | BA16H23.2 | BP180 | BPA-2 | BPAG2 | ERED | LAD-1 | collagen type XVII alpha 1 | | | 10q24.3 |
6975 | TECTB | - | tectorin beta | | | 10q25-q26 |
10418 | SPON1 | VSGP/F-spondin | f-spondin | spondin 1 | | | 11p15.2 |
10394 | PRG3 | MBP2 | MBPH | proteoglycan 3 | | | 11q12 |
5553 | PRG2 | BMPG | MBP | MBP1 | proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) | | | 11q12 |
220001 | VWCE | URG11 | VWC1 | von Willebrand factor C and EGF domains | | | 11q12.2 |
25987 | TSKU | E2IG4 | LRRC54 | TSK | tsukushi, small leucine rich proteoglycan | | | 11q13.5 |
4013 | VWA5A | BCSC-1 | BCSC1 | LOH11CR2A | von Willebrand factor A domain containing 5A | | | 11q24.1 |
4256 | MGP | GIG36 | MGLAP | NTI | matrix Gla protein | | | 12p12.3 |
7450 | VWF | F8VWF | VWD | von Willebrand factor | | | 12p13.3 |
1280 | COL2A1 | ANFH | AOM | COL11A3 | SEDC | STL1 | collagen type II alpha 1 | | | 12q13.11 |
1833 | EPYC | DSPG3 | PGLB | Pg-Lb | SLRR3B | epiphycan | | | 12q21 |
1634 | DCN | CSCD | DSPG2 | PG40 | PGII | PGS2 | SLRR1B | decorin | | | 12q21.33 |
59277 | NTN4 | PRO3091 | netrin 4 | | | 12q22 |
1282 | COL4A1 | BSVD | RATOR | collagen type IV alpha 1 | | | 13q34 |
1284 | COL4A2 | ICH | POREN2 | collagen type IV alpha 2 | | | 13q34 |
1690 | COCH | COCH-5B2 | COCH5B2 | DFNA9 | cochlin | | | 14q11.2-q13 |
22795 | NID2 | NID-2 | nidogen 2 | | | 14q22.1 |
89932 | PAPLN | - | papilin, proteoglycan-like sulfated glycoprotein | | | 14q24.2 |
64093 | SMOC1 | OAS | SPARC related modular calcium binding 1 | | | 14q24.2 |
7057 | THBS1 | THBS | THBS-1 | TSP | TSP-1 | TSP1 | thrombospondin 1 | | | 15q15 |
4236 | MFAP1 | - | microfibrillar associated protein 1 | | | 15q15.3 |
2200 | FBN1 | ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2 | fibrillin 1 | | | 15q21.1 |
342035 | GLDN | CLOM | COLM | CRG-L2 | CRGL2 | UNC-112 | gliomedin | | | 15q21.2 |
79875 | THSD4 | ADAMTSL-6 | ADAMTSL6 | FVSY9334 | PRO34005 | thrombospondin type 1 domain containing 4 | | | 15q23 |
4240 | MFGE8 | BA46 | EDIL1 | HMFG | HsT19888 | MFG-E8 | MFGM | OAcGD3S | SED1 | SPAG10 | hP47 | milk fat globule-EGF factor 8 protein | | | 15q25 |
145864 | HAPLN3 | EXLD1 | HsT19883 | hyaluronan and proteoglycan link protein 3 | | | 15q26.1 |
176 | ACAN | AGC1 | AGCAN | CSPG1 | CSPGCP | MSK16 | SEDK | aggrecan | | | 15q26.1 |
146177 | VWA3A | - | von Willebrand factor A domain containing 3A | | | 16p12.2 |
3483 | IGFALS | ACLSD | ALS | insulin like growth factor binding protein acid labile subunit | | | 16p13.3 |
4239 | MFAP4 | - | microfibrillar associated protein 4 | | | 17p11.2 |
9423 | NTN1 | NTN1L | netrin 1 | | | 17p13.1 |
3487 | IGFBP4 | BP-4 | HT29-IGFBP | IBP4 | IGFBP-4 | insulin like growth factor binding protein 4 | | | 17q21.2 |
284217 | LAMA1 | LAMA | PTBHS | S-LAM-alpha | laminin subunit alpha 1 | | | 18p11.3 |
1463 | NCAN | CSPG3 | neurocan | | | 19p12 |
1311 | COMP | EDM1 | EPD1 | MED | PSACH | THBS5 | cartilage oligomeric matrix protein | | | 19p13.1 |
404037 | HAPLN4 | BRAL2 | hyaluronan and proteoglycan link protein 4 | | | 19p13.1 |
148113 | CILP2 | CLIP-2 | cartilage intermediate layer protein 2 | | | 19p13.11 |
50509 | COL5A3 | - | collagen type V alpha 3 | | | 19p13.2 |
8425 | LTBP4 | ARCL1C | LTBP-4 | LTBP4L | LTBP4S | latent transforming growth factor beta binding protein 4 | | | 19q13.1-q13.2 |
100131137 | BSPH1 | BSP1 | ELSPBP2 | binder of sperm protein homolog 1 | | | 19q13.33 |
22854 | NTNG1 | Lmnt1 | netrin G1 | | | 1p13.3 |
1301 | COL11A1 | CO11A1 | COLL6 | STL2 | collagen type XI alpha 1 | | | 1p21 |
1298 | COL9A2 | DJ39G22.4 | EDM2 | MED | STL5 | collagen type IX alpha 2 | | | 1p33-p32 |
1296 | COL8A2 | FECD | FECD1 | PPCD | PPCD2 | collagen type VIII alpha 2 | | | 1p34.2 |
284654 | RSPO1 | CRISTIN3 | RSPO | R-spondin 1 | | | 1p34.3 |
4146 | MATN1 | CMP | CRTM | matrilin 1, cartilage matrix protein | | | 1p35 |
3339 | HSPG2 | HSPG | PLC | PRCAN | SJA | SJS | SJS1 | heparan sulfate proteoglycan 2 | | | 1p36.1-p34 |
4237 | MFAP2 | MAGP | MAGP-1 | MAGP1 | microfibrillar associated protein 2 | | | 1p36.1-p35 |
375790 | AGRN | CMS8 | CMSPPD | agrin | | | 1p36.33 |
64856 | VWA1 | WARP | von Willebrand factor A domain containing 1 | | | 1p36.33 |
1805 | DPT | TRAMP | dermatopontin | | | 1q12-q23 |
1893 | ECM1 | URBWD | extracellular matrix protein 1 | | | 1q21 |
7059 | THBS3 | TSP3 | thrombospondin 3 | | | 1q21 |
63923 | TNN | TN-W | tenascin N | | | 1q23-q24 |
60484 | HAPLN2 | BRAL1 | hyaluronan and proteoglycan link protein 2 | | | 1q23.1 |
7143 | TNR | TN-R | tenascin R | | | 1q24 |
10216 | PRG4 | CACP | HAPO | JCAP | MSF | SZP | proteoglycan 4 | | | 1q25-q31 |
63827 | BCAN | BEHAB | CSPG7 | brevican | | | 1q31 |
2331 | FMOD | FM | SLRR2E | fibromodulin | | | 1q32 |
5549 | PRELP | MST161 | MSTP161 | SLRR2A | proline/arginine-rich end leucine-rich repeat protein | | | 1q32 |
4811 | NID1 | NID | nidogen 1 | | | 1q43 |
57829 | ZP4 | ZBP | ZP1 | ZPB | Zp-4 | zona pellucida glycoprotein 4 | | | 1q43 |
90187 | EMILIN3 | C20orf130 | EMILIN5 | dJ620E11.4 | elastin microfibril interfacer 3 | | | 20q12 |
3911 | LAMA5 | - | laminin subunit alpha 5 | | | 20q13.2-q13.3 |
57642 | COL20A1 | bA261N11.4 | collagen type XX alpha 1 | | | 20q13.33 |
1292 | COL6A2 | BTHLM1 | PP3610 | UCMD1 | collagen type VI alpha 2 | | | 21q22.3 |
80781 | COL18A1 | KNO | KNO1 | KS | collagen type XVIII alpha 1 | | | 21q22.3 |
54084 | TSPEAR | C21orf29 | DFNB98 | TSP-EAR | thrombospondin-type laminin G domain and EAR repeats | | | 21q22.3 |
150356 | CHADL | SLRR4B | chondroadherin like | | | 22q13.2 |
79174 | CRELD2 | - | cysteine rich with EGF like domains 2 | | | 22q13.33 |
2202 | EFEMP1 | DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5 | EGF containing fibulin-like extracellular matrix protein 1 | | | 2p16 |
51232 | CRIM1 | CRIM-1 | S52 | cysteine rich transmembrane BMP regulator 1 (chordin-like) | | | 2p21 |
5212 | VIT | - | vitrin | | | 2p22.2 |
11117 | EMILIN1 | EMI | EMILIN | gp115 | elastin microfibril interfacer 1 | | | 2p23.3-p23.2 |
7837 | PXDN | COPOA | D2S448 | D2S448E | MG50 | PRG2 | PXN | VPO | peroxidasin | | | 2p25 |
7130 | TNFAIP6 | TSG-6 | TSG6 | TNF alpha induced protein 6 | | | 2q23.3 |
1281 | COL3A1 | EDS4A | collagen type III alpha 1 | | | 2q31 |
2335 | FN1 | CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSF | fibronectin 1 | | | 2q34 |
3485 | IGFBP2 | IBP2 | IGF-BP53 | insulin like growth factor binding protein 2 | | | 2q35 |
1286 | COL4A4 | CA44 | collagen type IV alpha 4 | | | 2q35-q37 |
3913 | LAMB2 | LAMS | NPHS5 | laminin subunit beta 2 | | | 3p21 |
1294 | COL7A1 | EBD1 | EBDCT | EBR1 | NDNC8 | collagen type VII alpha 1 | | | 3p21.1 |
2199 | FBLN2 | - | fibulin 2 | | | 3p25.1 |
78987 | CRELD1 | AVSD2 | CIRRIN | cysteine rich with EGF like domains 1 | | | 3p25.3 |
1295 | COL8A1 | C3orf7 | collagen type VIII alpha 1 | | | 3q12.3 |
26577 | PCOLCE2 | PCPE2 | procollagen C-endopeptidase enhancer 2 | | | 3q21-q24 |
285313 | IGSF10 | CMF608 | immunoglobulin superfamily member 10 | | | 3q25.1 |
131149 | OTOL1 | C1QTNF15 | otolin 1 | | | 3q26.1 |
9370 | ADIPOQ | ACDC | ACRP30 | ADIPQTL1 | ADPN | APM-1 | APM1 | GBP28 | adiponectin, C1Q and collagen domain containing | | | 3q27 |
55203 | LGI2 | LGIL2 | leucine-rich repeat LGI family member 2 | | | 4p15.2 |
9353 | SLIT2 | SLIL3 | Slit-2 | slit guidance ligand 2 | | | 4p15.2 |
10417 | SPON2 | DIL-1 | DIL1 | M-SPONDIN | MINDIN | spondin 2 | | | 4p16.3 |
3490 | IGFBP7 | AGM | FSTL2 | IBP-7 | IGFBP-7 | IGFBP-7v | IGFBPRP1 | MAC25 | PSF | RAMSVPS | TAF | insulin like growth factor binding protein 7 | | | 4q12 |
80144 | FRAS1 | - | Fraser extracellular matrix complex subunit 1 | | | 4q21.21 |
22915 | MMRN1 | ECM | EMILIN4 | GPIa* | MMRN | multimerin 1 | | | 4q22 |
6696 | SPP1 | BNSP | BSPI | ETA-1 | OPN | secreted phosphoprotein 1 | | | 4q22.1 |
8404 | SPARCL1 | MAST 9 | MAST9 | PIG33 | SC1 | SPARC like 1 | | | 4q22.1 |
255743 | NPNT | EGFL6L | POEM | nephronectin | | | 4q24 |
84570 | COL25A1 | AMY | CFEOM5 | CLAC | CLAC-P | CLACP | collagen type XXV alpha 1 | | | 4q25 |
2243 | FGA | Fib2 | fibrinogen alpha chain | | | 4q28 |
2266 | FGG | - | fibrinogen gamma chain | | | 4q28 |
50859 | SPOCK3 | HSAJ1454 | TES-3 | TICN3 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 | | | 4q32.3 |
133584 | EGFLAM | AGRINL | AGRNL | PIKA | EGF like, fibronectin type III and laminin G domains | | | 5p13.2-p13.1 |
11082 | ESM1 | endocan | endothelial cell specific molecule 1 | | | 5q11.2 |
7060 | THBS4 | TSP-4 | TSP4 | thrombospondin 4 | | | 5q13 |
10085 | EDIL3 | DEL1 | EGF like repeats and discoidin domains 3 | | | 5q14 |
1404 | HAPLN1 | CRT1 | CRTL1 | hyaluronan and proteoglycan link protein 1 | | | 5q14.3 |
1462 | VCAN | CSPG2 | ERVR | GHAP | PG-M | WGN | WGN1 | versican | | | 5q14.3 |
7045 | TGFBI | BIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1 | transforming growth factor beta induced | | | 5q31 |
6695 | SPOCK1 | SPOCK | TESTICAN | TIC1 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 | | | 5q31.2 |
4238 | MFAP3 | - | microfibrillar associated protein 3 | | | 5q32-q33.2 |
6586 | SLIT3 | MEGF5 | SLIL2 | SLIT1 | Slit-3 | slit2 | slit guidance ligand 3 | | | 5q35 |
91522 | COL23A1 | - | collagen type XXIII alpha 1 | | | 5q35.3 |
81578 | COL21A1 | COLA1L | FP633 | collagen type XXI alpha 1 | | | 6p12.3-p11.2|6p12.3-p11.2 |
1302 | COL11A2 | DFNA13 | DFNB53 | FBCG2 | HKE5 | PARP | STL3 | collagen type XI alpha 2 | | | 6p21.3 |
7148 | TNXB | EDS3 | HXBL | TENX | TN-X | TNX | TNXB1 | TNXB2 | TNXBS | VUR8 | XB | XBS | tenascin XB | | | 6p21.3 |
80737 | VWA7 | C6orf27 | G7c | NG37 | von Willebrand factor A domain containing 7 | | | 6p21.33 |
3617 | IMPG1 | GP147 | IPM150 | SPACR | VMD4 | interphotoreceptor matrix proteoglycan 1 | | | 6q14.2-q15 |
8838 | WISP3 | CCN6 | LIBC | PPAC | PPD | WISP-3 | WNT1 inducible signaling pathway protein 3 | | | 6q21 |
3910 | LAMA4 | CMD1JJ | LAMA3 | LAMA4*-1 | laminin subunit alpha 4 | | | 6q21 |
3908 | LAMA2 | LAMM | laminin subunit alpha 2 | | | 6q22-q23 |
84870 | RSPO3 | CRISTIN1 | PWTSR | THSD2 | R-spondin 3 | | | 6q22.33 |
7058 | THBS2 | TSP2 | thrombospondin 2 | | | 6q27 |
3486 | IGFBP3 | BP-53 | IBP3 | insulin like growth factor binding protein 3 | | | 7p12.3 |
168667 | BMPER | CRIM3 | CV-2 | CV2 | BMP binding endothelial regulator | | | 7p14.3 |
221806 | VWDE | - | von Willebrand factor D and EGF domains | | | 7p21.3 |
340267 | COL28A1 | COL28 | collagen type XXVIII alpha 1 | | | 7p21.3 |
2006 | ELN | SVAS | WBS | WS | elastin | | | 7q11.23 |
10875 | FGL2 | T49 | pT49 | fibrinogen like 2 | | | 7q11.23 |
5649 | RELN | ETL7 | LIS2 | PRO1598 | RL | reelin | | | 7q22 |
1278 | COL1A2 | OI4 | collagen type I alpha 2 | | | 7q22.1 |
136227 | COL26A1 | EMI6 | EMID2 | EMU2 | SH2B | collagen type XXVI alpha 1 | | | 7q22.1 |
23145 | SSPO | - | SCO-spondin | | | 7q36.1 |
137902 | PXDNL | PMR1 | PRM1 | VPO2 | peroxidasin like | | | 8q11.22-q11.23 |
115908 | CTHRC1 | - | collagen triple helix repeat containing 1 | | | 8q22.3 |
7373 | COL14A1 | UND | collagen type XIV alpha 1 | | | 8q23 |
340419 | RSPO2 | CRISTIN2 | R-spondin 2 | | | 8q23.1 |
4856 | NOV | CCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVh | nephroblastoma overexpressed | | | 8q24.1 |
169044 | COL22A1 | - | collagen type XXII alpha 1 | | | 8q24.3 |
1306 | COL15A1 | - | collagen type XV alpha 1 | | | 9q21-q22 |
4958 | OMD | OSAD | SLRR2C | osteomodulin | | | 9q22.31 |
85301 | COL27A1 | STLS | collagen type XXVII alpha 1 | | | 9q32 |
84628 | NTNG2 | LHLL9381 | Lmnt2 | NTNG1 | bA479K20.1 | netrin G2 | | | 9q34 |
10319 | LAMC3 | OCCM | laminin subunit gamma 3 | | | 9q34.12 |
25878 | MXRA5 | - | matrix-remodelling associated 5 | | | Xp22.33 |