DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AGTTS
Uniprot ID:
Q92750
Source protein:
Transcription initiation factor TFIID subunit 4B
Source gene:
TAF4B
Class:
DEG_SPOP_SBC_1
Location:
491:495
E3 ligase:
SPOP
DEGRON score:
0.9528
ASA_SCORE:
69.84
COIL:
0.8912
CONS_SCORE:
0.3958
DSS_SCORE:
0.4066
HELIX:
0.0216
FCONS_SCORE:
1.0069
RIG_SCORE:
0.6617
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P486L
TCGA-AJ-A3EL
UCEC
TCGA
AGTTS
DEG_SPOP_SBC_1
0.1944
p.P486L
TCGA-B5-A3FC
UCEC
TCGA
AGTTS
DEG_SPOP_SBC_1
0.1944
p.P486L
DO41542
UCEC
ICGC
AGTTS
DEG_SPOP_SBC_1
0.1944
p.P486L
DO41871
UCEC
ICGC
AGTTS
DEG_SPOP_SBC_1
0.1944
p.V488D
TCGA-D9-A6EC
SKCM
TCGA
AGTTS
DEG_SPOP_SBC_1
0.25
p.V488D
DO50291
SKCM
ICGC
AGTTS
DEG_SPOP_SBC_1
0.25
p.P486H
TCGA-IB-7651
PAAD
TCGA
AGTTS
DEG_SPOP_SBC_1
0.1944
p.P486H
DO46657
PAAD
ICGC
AGTTS
DEG_SPOP_SBC_1
0.1944
p.A491S
DO229037
LICA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.7588
p.T493N
DO229253
THCA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.7055
Drug responses associated with TAF4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
974:978
AGTTS
SPOP
0.9922
More...
Q86YV5
Inactive tyrosine-protein kinase PRAG1
DEG_SPOP_SBC_1
215:219
AGTTS
SPOP
0.9938
More...
Q8TAQ2
SWI/SNF complex subunit SMARCC2
DEG_SPOP_SBC_1
741:745
AGTTS
SPOP
0.9966
More...
Q92750
Transcription initiation factor TFIID subunit 4B
DEG_SPOP_SBC_1
491:495
AGTTS
SPOP
0.9528
More...
Q96JP5
E3 ubiquitin-protein ligase ZFP91
DEG_SPOP_SBC_1
42:46
AGTTS
SPOP
0.9924
More...
Q99959
Plakophilin-2
DEG_SPOP_SBC_1
205:209
AGTTS
SPOP
0.9955
More...
Q9H228
Sphingosine 1-phosphate receptor 5
DEG_SPOP_SBC_1
233:237
AGTTS
SPOP
0.7632
More...