DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AGTTS
Uniprot ID:
Q99959
Source protein:
Plakophilin-2
Source gene:
PKP2
Class:
DEG_SPOP_SBC_1
Location:
205:209
E3 ligase:
SPOP
DEGRON score:
0.9955
ASA_SCORE:
62.78
COIL:
0.841
CONS_SCORE:
0.3433
DSS_SCORE:
0.4779
HELIX:
0.0748
FCONS_SCORE:
0.9013
RIG_SCORE:
0.6619
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H213Y
TCGA-61-2012
OV
TCGA
AGTTS
DEG_SPOP_SBC_1
0.2222
p.H213Y
DO32536
OV
ICGC
AGTTS
DEG_SPOP_SBC_1
0.2222
p.R204L
TCGA-63-5128
LUSC
TCGA
AGTTS
DEG_SPOP_SBC_1
0.3056
p.R204L
DO27255
LUSC
ICGC
AGTTS
DEG_SPOP_SBC_1
0.3056
p.R212H
TCGA-A6-2686
COAD
TCGA
AGTTS
DEG_SPOP_SBC_1
0.25
p.R212H
TCGA-IB-7651
PAAD
TCGA
AGTTS
DEG_SPOP_SBC_1
0.25
p.R212H
DO7828
COAD
ICGC
AGTTS
DEG_SPOP_SBC_1
0.25
p.R212H
DO46657
PAAD
ICGC
AGTTS
DEG_SPOP_SBC_1
0.25
p.R212H
SIDM02041
Colorectal Carcinoma
GDSC
AGTTS
DEG_SPOP_SBC_1
0.25
p.R196C
TCGA-EB-A431
SKCM
TCGA
AGTTS
DEG_SPOP_SBC_1
0.0833
p.R196C
DO37671
SKCM
ICGC
AGTTS
DEG_SPOP_SBC_1
0.0833
p.R204H
TCGA-EO-A22S
UCEC
TCGA
AGTTS
DEG_SPOP_SBC_1
0.3056
p.R204H
DO41590
UCEC
ICGC
AGTTS
DEG_SPOP_SBC_1
0.3056
p.R196H
DO233869
GACA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.0833
p.R196H
ACH-001610
Brain Cancer
CCLE
AGTTS
DEG_SPOP_SBC_1
0.0833
p.H218Q
DO229027
LICA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.0833
p.S209R
DO229026
LICA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.7427
p.R219K
DO222527
MELA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.0556
p.R210M
DO232061
ORCA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.3056
p.R219I
DO232761
PBCA
ICGC
AGTTS
DEG_SPOP_SBC_1
0.0556
p.V202A
SIDM00656
Burkitt's Lymphoma
GDSC
AGTTS
DEG_SPOP_SBC_1
0.25
p.R196L
SIDM01158
Squamous Cell Lung Carcinoma
GDSC
AGTTS
DEG_SPOP_SBC_1
0.0833
p.R196L
ACH-000669
Lung Cancer
CCLE
AGTTS
DEG_SPOP_SBC_1
0.0833
p.R196L
SW900
lung
COSMIC
AGTTS
DEG_SPOP_SBC_1
0.0833
p.V200M
ACH-002287
Colon/Colorectal Cancer
CCLE
AGTTS
DEG_SPOP_SBC_1
0.1944
p.V200M
NCI-H630
large_intestine
COSMIC
AGTTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with PKP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
974:978
AGTTS
SPOP
0.9922
More...
Q86YV5
Inactive tyrosine-protein kinase PRAG1
DEG_SPOP_SBC_1
215:219
AGTTS
SPOP
0.9938
More...
Q8TAQ2
SWI/SNF complex subunit SMARCC2
DEG_SPOP_SBC_1
741:745
AGTTS
SPOP
0.9966
More...
Q92750
Transcription initiation factor TFIID subunit 4B
DEG_SPOP_SBC_1
491:495
AGTTS
SPOP
0.9528
More...
Q96JP5
E3 ubiquitin-protein ligase ZFP91
DEG_SPOP_SBC_1
42:46
AGTTS
SPOP
0.9924
More...
Q99959
Plakophilin-2
DEG_SPOP_SBC_1
205:209
AGTTS
SPOP
0.9955
More...
Q9H228
Sphingosine 1-phosphate receptor 5
DEG_SPOP_SBC_1
233:237
AGTTS
SPOP
0.7632
More...