DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AHSTS
Uniprot ID:
Q12816
Source protein:
Trophinin
Source gene:
TRO
Class:
DEG_SPOP_SBC_1
Location:
798:802
E3 ligase:
SPOP
DEGRON score:
0.7651
ASA_SCORE:
81.36
COIL:
0.7822
CONS_SCORE:
0.6042
DSS_SCORE:
0.1577
HELIX:
0.0562
FCONS_SCORE:
1.2389
RIG_SCORE:
0.7133
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S800I
TCGA-2Y-A9GZ
LIHC
TCGA
AHSTS
DEG_SPOP_SBC_1
0.7341
p.S800I
TCGA-AX-A06F
UCEC
TCGA
AHSTS
DEG_SPOP_SBC_1
0.7341
p.S788G
TCGA-BR-4368
STAD
TCGA
AHSTS
DEG_SPOP_SBC_1
0.0556
p.S788G
DO38715
STAD
ICGC
AHSTS
DEG_SPOP_SBC_1
0.0556
p.T798P
DO11166
GBM
ICGC
AHSTS
DEG_SPOP_SBC_1
0.7031
p.G796V
DO228978
LICA
ICGC
AHSTS
DEG_SPOP_SBC_1
0.2778
p.S807R
DO24070
LUAD
ICGC
AHSTS
DEG_SPOP_SBC_1
0.1944
p.S812I
DO46488
OV
ICGC
AHSTS
DEG_SPOP_SBC_1
0.0556
p.D792E
DO229453
SKCA
ICGC
AHSTS
DEG_SPOP_SBC_1
0.1667
p.H799P
SIDM00656
Burkitt's Lymphoma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.H799P
SIDM00087
Plasma Cell Myeloma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.H799P
SIDM00863
Burkitt's Lymphoma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.H799P
SIDM00720
Mesothelioma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.H799P
SIDM00785
Acute Myeloid Leukemia
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.H799P
SIDM00641
Burkitt's Lymphoma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.H799P
SIDM01640
Acute Myeloid Leukemia
GDSC
AHSTS
DEG_SPOP_SBC_1
0.6583
p.S806I
SIDM00687
Gastric Carcinoma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.2222
p.S806I
ACH-000793
Gastric Cancer
CCLE
AHSTS
DEG_SPOP_SBC_1
0.2222
p.S806I
KATOIII
stomach
COSMIC
AHSTS
DEG_SPOP_SBC_1
0.2222
p.S800N
SIDM01617
Endometrial Carcinoma
GDSC
AHSTS
DEG_SPOP_SBC_1
0.7069
p.S800N
ACH-000994
Endometrial/Uterine Cancer
CCLE
AHSTS
DEG_SPOP_SBC_1
0.7069
p.A791T
ACH-001991
Primary
CCLE
AHSTS
DEG_SPOP_SBC_1
0.1389
p.L804M
NCI-H1417
lung
COSMIC
AHSTS
DEG_SPOP_SBC_1
0.2778
p.T806I
SW1271
lung
COSMIC
AHSTS
DEG_SPOP_SBC_1
0.2222
p.G793V
OPM-2
haematopoietic_and_lymphoid_tissue
COSMIC
AHSTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with TRO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AHSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12816
Trophinin
DEG_SPOP_SBC_1
798:802
AHSTS
SPOP
0.7651
More...
Q58WW2
DDB1- and CUL4-associated factor 6
DEG_SPOP_SBC_1
421:425
AHSTS
SPOP
0.5333
More...
Q5T8A7
Protein phosphatase 1 regulatory subunit 26
DEG_SPOP_SBC_1
404:408
AHSTS
SPOP
0.5117
More...
Q9UKL3
CASP8-associated protein 2
DEG_SPOP_SBC_1
895:899
AHSTS
SPOP
0.9976
More...
Q9UPP1
Histone lysine demethylase PHF8
DEG_SPOP_SBC_1
508:512
AHSTS
SPOP
0.997
More...
Q5JV73
FERM and PDZ domain-containing protein 3
DEG_SPOP_SBC_1
1230:1234
AHSTS
SPOP
0.9223
More...