DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AISTT
Uniprot ID:
Q5T4S7
Source protein:
E3 ubiquitin-protein ligase UBR4
Source gene:
UBR4
Class:
DEG_SPOP_SBC_1
Location:
2939:2943
E3 ligase:
SPOP
DEGRON score:
0.9886
ASA_SCORE:
80.9
COIL:
0.8632
CONS_SCORE:
0.3085
DSS_SCORE:
0.7555
HELIX:
0.0396
FCONS_SCORE:
0.9706
RIG_SCORE:
0.6008
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G2949E
TCGA-EE-A2MT
SKCM
TCGA
AISTT
DEG_SPOP_SBC_1
0.1667
p.H2941Q
DO229019
LICA
ICGC
AISTT
DEG_SPOP_SBC_1
0.7582
p.H2947N
DO229032
LICA
ICGC
AISTT
DEG_SPOP_SBC_1
0.2222
p.G2938R
DO23516
LIRI
ICGC
AISTT
DEG_SPOP_SBC_1
0.3056
p.D2939N
DO51294
SKCM
ICGC
AISTT
DEG_SPOP_SBC_1
0.6932
Drug responses associated with UBR4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AISTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q06413
Myocyte-specific enhancer factor 2C
DEG_SPOP_SBC_1
314:318
AISTT
SPOP
0.8725
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2939:2943
AISTT
SPOP
0.9886
More...
Q6P0Q8
Microtubule-associated serine/threonine-protein kinase 2
DEG_SPOP_SBC_1
1185:1189
AISTT
SPOP
0.6094
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11306:11310
AISTT
SPOP
0.8088
More...
Q9NP73
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
DEG_SPOP_SBC_1
873:877
AISTT
SPOP
0.9865
More...
Q9H6B1
Zinc finger protein 385D
DEG_SPOP_SBC_1
154:158
AISTT
SPOP
0.9854
More...