DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AITSS
Uniprot ID:
A8CG34
Source protein:
Nuclear envelope pore membrane protein POM 121C
Source gene:
POM121C
Class:
DEG_SPOP_SBC_1
Location:
389:393
E3 ligase:
SPOP
DEGRON score:
0.9987
ASA_SCORE:
70.94
COIL:
0.834
CONS_SCORE:
0.8653
DSS_SCORE:
0.5109
HELIX:
0.0296
FCONS_SCORE:
1.0951
RIG_SCORE:
0.6963
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P403A
TCGA-44-8117
LUAD
TCGA
AITSS
DEG_SPOP_SBC_1
0.0556
p.L383I
TCGA-BR-8591
STAD
TCGA
AITSS
DEG_SPOP_SBC_1
0.1667
p.A402V
TCGA-F4-6856
COAD
TCGA
AITSS
DEG_SPOP_SBC_1
0.0833
p.S387F
TCGA-FR-A8YC
SKCM
TCGA
AITSS
DEG_SPOP_SBC_1
0.2778
p.S393F
DO37871
SKCM
ICGC
AITSS
DEG_SPOP_SBC_1
0.9093
p.I382T
DO42673
UCEC
ICGC
AITSS
DEG_SPOP_SBC_1
0.1389
p.R387C
ACH-000634
Brain Cancer
CCLE
AITSS
DEG_SPOP_SBC_1
0.2778
p.S385F
ACH-002236
Lymphoma
CCLE
AITSS
DEG_SPOP_SBC_1
0.6667
p.S385F
EB-3
haematopoietic_and_lymphoid_tissue
COSMIC
AITSS
DEG_SPOP_SBC_1
0.6667
p.P401H
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
AITSS
DEG_SPOP_SBC_1
0.5556
p.T397A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
AITSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with POM121C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AITSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
389:393
AITSS
SPOP
0.9987
More...
Q5RL73
RNA-binding protein 48
DEG_SPOP_SBC_1
264:268
AITSS
SPOP
0.6026
More...
Q8N1G0
Zinc finger protein 687
DEG_SPOP_SBC_1
639:643
AITSS
SPOP
0.9699
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
412:416
AITSS
SPOP
0.9984
More...
Q9Y2F5
Little elongation complex subunit 1
DEG_SPOP_SBC_1
236:240
AITSS
SPOP
0.9901
More...
Q6ZVF9
G protein-regulated inducer of neurite outgrowth 3
DEG_SPOP_SBC_1
145:149
AITSS
SPOP
0.9606
More...