DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ANTST
Uniprot ID:
Q9H361
Source protein:
Polyadenylate-binding protein 3
Source gene:
PABPC3
Class:
DEG_SPOP_SBC_1
Location:
477:481
E3 ligase:
SPOP
DEGRON score:
0.9952
ASA_SCORE:
81.98
COIL:
0.927
CONS_SCORE:
0.26
DSS_SCORE:
0.6179
HELIX:
0.0504
FCONS_SCORE:
0.9036
RIG_SCORE:
0.6858
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A477V
TCGA-AA-A010
COAD
TCGA
ANTST
DEG_SPOP_SBC_1
0.5825
p.Q482H
TCGA-AN-A046
BRCA
TCGA
ANTST
DEG_SPOP_SBC_1
0.3056
p.Q482H
DO1285
BRCA
ICGC
ANTST
DEG_SPOP_SBC_1
0.3056
p.R475H
TCGA-AP-A0LM
UCEC
TCGA
ANTST
DEG_SPOP_SBC_1
0.2778
p.R475H
DO43306
UCEC
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.T473M
TCGA-GV-A3JZ
BLCA
TCGA
ANTST
DEG_SPOP_SBC_1
0.2222
p.T473M
TCGA-VQ-A8P5
STAD
TCGA
ANTST
DEG_SPOP_SBC_1
0.2222
p.T473M
DO773
BLCA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2222
p.T473M
DO51763
STAD
ICGC
ANTST
DEG_SPOP_SBC_1
0.2222
p.T473M
SIDM00943
Pancreatic Carcinoma
GDSC
ANTST
DEG_SPOP_SBC_1
0.2222
p.T473M
ACH-000107
Pancreatic Cancer
CCLE
ANTST
DEG_SPOP_SBC_1
0.2222
p.T473M
Capan-2
pancreas
COSMIC
ANTST
DEG_SPOP_SBC_1
0.2222
p.V484M
DO48449
BLCA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO228926
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO228967
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO228972
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO229015
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO229034
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO229041
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.V484M
DO229046
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.25
p.R487C
DO48449
BLCA
ICGC
ANTST
DEG_SPOP_SBC_1
0.1667
p.A489T
DO230347
COCA
ICGC
ANTST
DEG_SPOP_SBC_1
0.1111
p.V470I
DO233797
GACA
ICGC
ANTST
DEG_SPOP_SBC_1
0.1389
p.R475C
DO228965
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.R475C
DO228972
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.R475C
DO229034
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.R475C
DO229047
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.R475C
DO229046
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.R475C
DO229055
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.2778
p.R469Q
DO229047
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.1111
p.R469Q
DO229053
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.1111
p.R469Q
DO229062
LICA
ICGC
ANTST
DEG_SPOP_SBC_1
0.1111
p.T479A
SIDM00333
Endometrial Carcinoma
GDSC
ANTST
DEG_SPOP_SBC_1
0.7139
p.T479A
ACH-000988
Endometrial/Uterine Cancer
CCLE
ANTST
DEG_SPOP_SBC_1
0.7139
p.T479A
MFE-319
endometrium
COSMIC
ANTST
DEG_SPOP_SBC_1
0.7139
p.S480L
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
ANTST
DEG_SPOP_SBC_1
0.8778
p.S480L
ACH-000852
Lung Cancer
CCLE
ANTST
DEG_SPOP_SBC_1
0.8778
p.S480L
NCI-H1435
lung
COSMIC
ANTST
DEG_SPOP_SBC_1
0.8778
Drug responses associated with PABPC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ANTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11940
Polyadenylate-binding protein 1
DEG_SPOP_SBC_1
483:487
ANTST
SPOP
0.9929
More...
Q5XPI4
E3 ubiquitin-protein ligase RNF123
DEG_SPOP_SBC_1
1305:1309
ANTST
SPOP
0.618
More...
Q6ZRI0
Otogelin
DEG_SPOP_SBC_1
2046:2050
ANTST
SPOP
0.621
More...
Q86WI1
Fibrocystin-L
DEG_SPOP_SBC_1
2964:2968
ANTST
SPOP
0.8314
More...
Q9BUJ2
Heterogeneous nuclear ribonucleoprotein U-like protein 1
DEG_SPOP_SBC_1
740:744
ANTST
SPOP
0.9875
More...
Q9H361
Polyadenylate-binding protein 3
DEG_SPOP_SBC_1
477:481
ANTST
SPOP
0.9952
More...