DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ARSTS
Uniprot ID:
O14874
Source protein:
[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial
Source gene:
BCKDK
Class:
DEG_SPOP_SBC_1
Location:
29:33
E3 ligase:
SPOP
DEGRON score:
0.999
ASA_SCORE:
74.52
COIL:
0.8198
CONS_SCORE:
0.3477
DSS_SCORE:
0.4469
HELIX:
0.0998
FCONS_SCORE:
1.1842
RIG_SCORE:
0.6727
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A34S
TCGA-AR-A251
BRCA
TCGA
ARSTS
DEG_SPOP_SBC_1
0.3056
p.A34S
DO5724
BRCA
ICGC
ARSTS
DEG_SPOP_SBC_1
0.3056
p.R30C
TCGA-CK-5913
COAD
TCGA
ARSTS
DEG_SPOP_SBC_1
0.719
p.R30C
DO8826
COAD
ICGC
ARSTS
DEG_SPOP_SBC_1
0.719
p.P23S
TCGA-CV-7568
HNSC
TCGA
ARSTS
DEG_SPOP_SBC_1
0.1667
p.P23S
DO14160
HNSC
ICGC
ARSTS
DEG_SPOP_SBC_1
0.1667
p.A24T
TCGA-FI-A2D5
UCEC
TCGA
ARSTS
DEG_SPOP_SBC_1
0.1944
p.A24T
TCGA-FS-A1ZT
SKCM
TCGA
ARSTS
DEG_SPOP_SBC_1
0.1944
p.A24T
DO37468
SKCM
ICGC
ARSTS
DEG_SPOP_SBC_1
0.1944
p.A24T
DO41331
UCEC
ICGC
ARSTS
DEG_SPOP_SBC_1
0.1944
p.A26V
TCGA-VQ-A8PT
STAD
TCGA
ARSTS
DEG_SPOP_SBC_1
0.25
p.A26V
DO233867
GACA
ICGC
ARSTS
DEG_SPOP_SBC_1
0.25
p.A26V
DO51776
STAD
ICGC
ARSTS
DEG_SPOP_SBC_1
0.25
p.L21R
DO234404
ESAD
ICGC
ARSTS
DEG_SPOP_SBC_1
0.1111
p.A24S
DO229037
LICA
ICGC
ARSTS
DEG_SPOP_SBC_1
0.1944
p.V40M
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
ARSTS
DEG_SPOP_SBC_1
0.1389
p.V40M
ACH-000924
Lung Cancer
CCLE
ARSTS
DEG_SPOP_SBC_1
0.1389
p.R30H
SIDM01007
T-Lymphoblastic Leukemia
GDSC
ARSTS
DEG_SPOP_SBC_1
0.7133
p.R30H
ACH-002256
Leukemia
CCLE
ARSTS
DEG_SPOP_SBC_1
0.7133
p.R30H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
ARSTS
DEG_SPOP_SBC_1
0.7133
Drug responses associated with BCKDK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ARSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00409
Forkhead box protein N3
DEG_SPOP_SBC_1
345:349
ARSTS
SPOP
0.9829
More...
O14874
[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial
DEG_SPOP_SBC_1
29:33
ARSTS
SPOP
0.999
More...
Q6ZSM3
Monocarboxylate transporter 12
DEG_SPOP_SBC_1
37:41
ARSTS
SPOP
0.6242
More...
Q9H3R0
Lysine-specific demethylase 4C
DEG_SPOP_SBC_1
376:380
ARSTS
SPOP
0.9041
More...
Q9BXK1
Krueppel-like factor 16
DEG_SPOP_SBC_1
222:226
ARSTS
SPOP
0.9312
More...
Q8NET4
Retrotransposon Gag-like protein 9
DEG_SPOP_SBC_1
1026:1030
ARSTS
SPOP
0.702
More...