DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AYSSS
Uniprot ID:
A8MTZ7
Source protein:
Uncharacterized protein C12orf71
Source gene:
C12orf71
Class:
DEG_SPOP_SBC_1
Location:
2:6
E3 ligase:
SPOP
DEGRON score:
0.8548
ASA_SCORE:
104.9
COIL:
0.9684
CONS_SCORE:
0.5285
DSS_SCORE:
0.843
HELIX:
0.0228
FCONS_SCORE:
1.0234
RIG_SCORE:
0.6709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D13N
TCGA-AN-A046
BRCA
TCGA
AYSSS
DEG_SPOP_SBC_1
0.1389
p.D13N
DO1285
BRCA
ICGC
AYSSS
DEG_SPOP_SBC_1
0.1389
p.D13N
SIDM01275
Esophageal Carcinoma
GDSC
AYSSS
DEG_SPOP_SBC_1
0.1389
p.D9N
TCGA-BR-A4QL
STAD
TCGA
AYSSS
DEG_SPOP_SBC_1
0.25
p.D9N
DO38723
STAD
ICGC
AYSSS
DEG_SPOP_SBC_1
0.25
p.D9E
DO229035
LICA
ICGC
AYSSS
DEG_SPOP_SBC_1
0.25
p.S14N
DO232224
PBCA
ICGC
AYSSS
DEG_SPOP_SBC_1
0.1111
p.S14I
SIDM00082
Melanoma
GDSC
AYSSS
DEG_SPOP_SBC_1
0.1111
p.S14I
ACH-001190
Skin Cancer
CCLE
AYSSS
DEG_SPOP_SBC_1
0.1111
p.E11Q
SIDM00708
Non-Small Cell Lung Carcinoma
GDSC
AYSSS
DEG_SPOP_SBC_1
0.1944
p.E11Q
ACH-000841
Lung Cancer
CCLE
AYSSS
DEG_SPOP_SBC_1
0.1944
p.I10V
SIDM01608
Endometrial Carcinoma
GDSC
AYSSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with C12orf71 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AYSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15047
Histone-lysine N-methyltransferase SETD1A
DEG_SPOP_SBC_1
286:290
AYSSS
SPOP
0.992
More...
P17661
Desmin
DEG_SPOP_SBC_1
4:8
AYSSS
SPOP
0.9409
More...
Q00613
Heat shock factor protein 1
DEG_SPOP_SBC_1
246:250
AYSSS
SPOP
0.885
More...
Q14191
Werner syndrome ATP-dependent helicase
DEG_SPOP_SBC_1
1137:1141
AYSSS
SPOP
0.5977
More...
Q7Z6R9
Transcription factor AP-2-delta
DEG_SPOP_SBC_1
39:43
AYSSS
SPOP
0.9904
More...
Q7Z739
YTH domain-containing family protein 3
DEG_SPOP_SBC_1
150:154
AYSSS
SPOP
0.9975
More...
Q9Y2L6
FERM domain-containing protein 4B
DEG_SPOP_SBC_1
673:677
AYSSS
SPOP
0.999
More...
A8MTZ7
Uncharacterized protein C12orf71
DEG_SPOP_SBC_1
2:6
AYSSS
SPOP
0.8548
More...