DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IKENK
Uniprot ID:
Q9NS91
Source protein:
E3 ubiquitin-protein ligase RAD18
Source gene:
RAD18
Class:
DEG_APCC_KENBOX_2
Location:
150:154
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9324
ASA_SCORE:
100.14
COIL:
0.5312
CONS_SCORE:
0.3897
DSS_SCORE:
0.5348
HELIX:
0.2588
FCONS_SCORE:
1.0528
RIG_SCORE:
0.7289
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S144F
TCGA-55-A493
LUAD
TCGA
IKENK
DEG_APCC_KENBOX_2
0.6111
p.S144F
DO26328
LUAD
ICGC
IKENK
DEG_APCC_KENBOX_2
0.6111
p.S155R
TCGA-BS-A0UF
UCEC
TCGA
IKENK
DEG_APCC_KENBOX_2
0.75
p.S155R
DO41488
UCEC
ICGC
IKENK
DEG_APCC_KENBOX_2
0.75
p.E140K
TCGA-EO-A3B0
UCEC
TCGA
IKENK
DEG_APCC_KENBOX_2
0.0556
p.E140K
DO219773
UCEC
ICGC
IKENK
DEG_APCC_KENBOX_2
0.0556
p.S142R
DO232761
PBCA
ICGC
IKENK
DEG_APCC_KENBOX_2
0.5556
Drug responses associated with RAD18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60476
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB
DEG_APCC_KENBOX_2
150:154
IKENK
APC,CDC20,FZR1
0.9671
More...
Q6IQ19
Centriole, cilia and spindle-associated protein
DEG_APCC_KENBOX_2
177:181
IKENK
APC,CDC20,FZR1
0.5499
More...
Q9NS91
E3 ubiquitin-protein ligase RAD18
DEG_APCC_KENBOX_2
150:154
IKENK
APC,CDC20,FZR1
0.9324
More...
Q5RHP9
Glutamate-rich protein 3
DEG_APCC_KENBOX_2
445:449
IKENK
APC,CDC20,FZR1
0.8691
More...
Q5JVX7
Uncharacterized protein C1orf141
DEG_APCC_KENBOX_2
150:154
IKENK
APC,CDC20,FZR1
0.9861
More...
Q5TEZ5
Uncharacterized protein C6orf163
DEG_APCC_KENBOX_2
321:325
IKENK
APC,CDC20,FZR1
0.8269
More...