DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LKEND
Uniprot ID:
Q14739
Source protein:
Delta
Source gene:
LBR
Class:
DEG_APCC_KENBOX_2
Location:
49:53
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9324
ASA_SCORE:
85.62
COIL:
0.5558
CONS_SCORE:
0.256
DSS_SCORE:
0.482
HELIX:
0.2704
FCONS_SCORE:
0.9756
RIG_SCORE:
0.8024
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E48A
TCGA-BS-A0TC
UCEC
TCGA
LKEND
DEG_APCC_KENBOX_2
0.3056
p.E48A
DO42400
UCEC
ICGC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.N52K
TCGA-FR-A726
SKCM
TCGA
LKEND
DEG_APCC_KENBOX_2
0.6918
p.N52K
DO48665
SKCM
ICGC
LKEND
DEG_APCC_KENBOX_2
0.6918
p.S59F
TCGA-QB-A6FS
SKCM
TCGA
LKEND
DEG_APCC_KENBOX_2
0.6111
p.S59F
DO48654
SKCM
ICGC
LKEND
DEG_APCC_KENBOX_2
0.6111
p.N52S
TCGA-R6-A6XQ
ESCA
TCGA
LKEND
DEG_APCC_KENBOX_2
0.7069
p.E51D
DO222884
COCA
ICGC
LKEND
DEG_APCC_KENBOX_2
0.6758
p.K40N
DO46518
OV
ICGC
LKEND
DEG_APCC_KENBOX_2
0.1944
p.E48K
SIDM00915
Small Cell Lung Carcinoma
GDSC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.E48K
NCI-H378
lung
COSMIC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.D43Y
ACH-000075
Brain Cancer
CCLE
LKEND
DEG_APCC_KENBOX_2
0.1667
p.E48G
ACH-001541
Myeloma
CCLE
LKEND
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with LBR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15344
E3 ubiquitin-protein ligase Midline-1
DEG_APCC_KENBOX_2
320:324
LKEND
APC,CDC20,FZR1
0.7656
More...
P29374
AT-rich interactive domain-containing protein 4A
DEG_APCC_KENBOX_2
744:748
LKEND
APC,CDC20,FZR1
0.5299
More...
P46013
Proliferation marker protein Ki-67
DEG_APCC_KENBOX_2
938:942
LKEND
APC,CDC20,FZR1
0.9316
More...
Q12923
Tyrosine-protein phosphatase non-receptor type 13
DEG_APCC_KENBOX_2
1071:1075
LKEND
APC,CDC20,FZR1
0.9955
More...
Q14739
Delta
DEG_APCC_KENBOX_2
49:53
LKEND
APC,CDC20,FZR1
0.9324
More...
Q8NI35
InaD-like protein
DEG_APCC_KENBOX_2
179:183
LKEND
APC,CDC20,FZR1
0.9898
More...
Q92743
Serine protease HTRA1
DEG_APCC_KENBOX_2
428:432
LKEND
APC,CDC20,FZR1
0.9566
More...