DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKEND
Uniprot ID:
Q92743
Source protein:
Serine protease HTRA1
Source gene:
HTRA1
Class:
DEG_APCC_KENBOX_2
Location:
428:432
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9566
ASA_SCORE:
69
COIL:
0.978
CONS_SCORE:
0.6399
DSS_SCORE:
0.3262
HELIX:
0.0056
FCONS_SCORE:
1.246
RIG_SCORE:
0.8125
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S441F
TCGA-AA-3977
COAD
TCGA
LKEND
DEG_APCC_KENBOX_2
0.0833
p.S441F
DO8730
COAD
ICGC
LKEND
DEG_APCC_KENBOX_2
0.0833
p.V433A
TCGA-AJ-A3EL
UCEC
TCGA
LKEND
DEG_APCC_KENBOX_2
0.3056
p.V433A
DO41542
UCEC
ICGC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.D432N
TCGA-AP-A056
UCEC
TCGA
LKEND
DEG_APCC_KENBOX_2
0.5821
p.D432N
TCGA-EB-A431
SKCM
TCGA
LKEND
DEG_APCC_KENBOX_2
0.5821
p.D432N
DO37671
SKCM
ICGC
LKEND
DEG_APCC_KENBOX_2
0.5821
p.D432N
DO43971
UCEC
ICGC
LKEND
DEG_APCC_KENBOX_2
0.5821
p.I434T
TCGA-BR-6458
STAD
TCGA
LKEND
DEG_APCC_KENBOX_2
0.2778
p.I434T
DO38296
STAD
ICGC
LKEND
DEG_APCC_KENBOX_2
0.2778
p.T421I
TCGA-BR-8680
STAD
TCGA
LKEND
DEG_APCC_KENBOX_2
0.1389
p.T421I
DO47769
STAD
ICGC
LKEND
DEG_APCC_KENBOX_2
0.1389
p.D420Y
TCGA-D3-A3C8
SKCM
TCGA
LKEND
DEG_APCC_KENBOX_2
0.1111
p.D420Y
DO47636
SKCM
ICGC
LKEND
DEG_APCC_KENBOX_2
0.1111
p.V433I
TCGA-D5-6928
COAD
TCGA
LKEND
DEG_APCC_KENBOX_2
0.3056
p.V433I
TCGA-EE-A2A2
SKCM
TCGA
LKEND
DEG_APCC_KENBOX_2
0.3056
p.V433I
TCGA-GM-A2DB
BRCA
TCGA
LKEND
DEG_APCC_KENBOX_2
0.3056
p.V433I
DO5179
BRCA
ICGC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.V433I
DO7776
COAD
ICGC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.V433I
DO37583
SKCM
ICGC
LKEND
DEG_APCC_KENBOX_2
0.3056
p.E430K
TCGA-EE-A3JD
SKCM
TCGA
LKEND
DEG_APCC_KENBOX_2
0.7022
p.E430K
DO229453
SKCA
ICGC
LKEND
DEG_APCC_KENBOX_2
0.7022
p.E430K
DO50299
SKCM
ICGC
LKEND
DEG_APCC_KENBOX_2
0.7022
p.T421N
DO234270
ESAD
ICGC
LKEND
DEG_APCC_KENBOX_2
0.1389
p.V442M
DO233652
GACA
ICGC
LKEND
DEG_APCC_KENBOX_2
0.0556
p.S436N
SIDM00537
Colorectal Carcinoma
GDSC
LKEND
DEG_APCC_KENBOX_2
0.2222
p.S436N
ACH-000982
Colon/Colorectal Cancer
CCLE
LKEND
DEG_APCC_KENBOX_2
0.2222
p.S436N
ACH-001345
Colon/Colorectal Cancer
CCLE
LKEND
DEG_APCC_KENBOX_2
0.2222
p.S436N
GP5d
large_intestine
COSMIC
LKEND
DEG_APCC_KENBOX_2
0.2222
Drug responses associated with HTRA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15344
E3 ubiquitin-protein ligase Midline-1
DEG_APCC_KENBOX_2
320:324
LKEND
APC,CDC20,FZR1
0.7656
More...
P29374
AT-rich interactive domain-containing protein 4A
DEG_APCC_KENBOX_2
744:748
LKEND
APC,CDC20,FZR1
0.5299
More...
P46013
Proliferation marker protein Ki-67
DEG_APCC_KENBOX_2
938:942
LKEND
APC,CDC20,FZR1
0.9316
More...
Q12923
Tyrosine-protein phosphatase non-receptor type 13
DEG_APCC_KENBOX_2
1071:1075
LKEND
APC,CDC20,FZR1
0.9955
More...
Q14739
Delta
DEG_APCC_KENBOX_2
49:53
LKEND
APC,CDC20,FZR1
0.9324
More...
Q8NI35
InaD-like protein
DEG_APCC_KENBOX_2
179:183
LKEND
APC,CDC20,FZR1
0.9898
More...
Q92743
Serine protease HTRA1
DEG_APCC_KENBOX_2
428:432
LKEND
APC,CDC20,FZR1
0.9566
More...