DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENS
Uniprot ID:
A7XYQ1
Source protein:
Sine oculis-binding protein homolog
Source gene:
SOBP
Class:
DEG_APCC_KENBOX_2
Location:
77:81
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9117
ASA_SCORE:
99.58
COIL:
0.7372
CONS_SCORE:
0.6162
DSS_SCORE:
0.5413
HELIX:
0.186
FCONS_SCORE:
1.13
RIG_SCORE:
0.7143
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q72R
TCGA-AX-A1C4
UCEC
TCGA
LKENS
DEG_APCC_KENBOX_2
0.1944
p.Q72R
DO42480
UCEC
ICGC
LKENS
DEG_APCC_KENBOX_2
0.1944
p.E69K
TCGA-G9-6369
PRAD
TCGA
LKENS
DEG_APCC_KENBOX_2
0.1111
p.E69K
DO36310
PRAD
ICGC
LKENS
DEG_APCC_KENBOX_2
0.1111
p.D90Y
TCGA-W5-AA2U
CHOL
TCGA
LKENS
DEG_APCC_KENBOX_2
0.0833
p.S81Y
DO7801
COAD
ICGC
LKENS
DEG_APCC_KENBOX_2
0.6009
p.S81Y
SIDM00193
Colorectal Carcinoma
GDSC
LKENS
DEG_APCC_KENBOX_2
0.6009
p.S81Y
ACH-000991
Colon/Colorectal Cancer
CCLE
LKENS
DEG_APCC_KENBOX_2
0.6009
p.S81Y
SNU-81
large_intestine
COSMIC
LKENS
DEG_APCC_KENBOX_2
0.6009
p.L77I
DO8898
COAD
ICGC
LKENS
DEG_APCC_KENBOX_2
0.6063
p.L77R
DO233866
GACA
ICGC
LKENS
DEG_APCC_KENBOX_2
0.7316
p.G68V
DO228976
LICA
ICGC
LKENS
DEG_APCC_KENBOX_2
0.0833
p.R71W
SIDM01779
Gastric Carcinoma
GDSC
LKENS
DEG_APCC_KENBOX_2
0.1667
p.R71W
ACH-000761
Gastric Cancer
CCLE
LKENS
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with SOBP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28289
Tropomodulin-1
DEG_APCC_KENBOX_2
220:224
LKENS
APC,CDC20,FZR1
0.5457
More...
Q8TBJ5
Fez family zinc finger protein 2
DEG_APCC_KENBOX_2
246:250
LKENS
APC,CDC20,FZR1
0.938
More...
Q8TF72
Protein Shroom3
DEG_APCC_KENBOX_2
1710:1714
LKENS
APC,CDC20,FZR1
0.735
More...
Q9H1H9
Kinesin-like protein KIF13A
DEG_APCC_KENBOX_2
1669:1673
LKENS
APC,CDC20,FZR1
0.9972
More...
A7XYQ1
Sine oculis-binding protein homolog
DEG_APCC_KENBOX_2
77:81
LKENS
APC,CDC20,FZR1
0.9117
More...
Q5THK1
Protein PRR14L
DEG_APCC_KENBOX_2
336:340
LKENS
APC,CDC20,FZR1
0.998
More...