DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENS
Uniprot ID:
Q8TF72
Source protein:
Protein Shroom3
Source gene:
SHROOM3
Class:
DEG_APCC_KENBOX_2
Location:
1710:1714
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.735
ASA_SCORE:
99.54
COIL:
0.5946
CONS_SCORE:
0.2183
DSS_SCORE:
0.3396
HELIX:
0.4002
FCONS_SCORE:
0.6173
RIG_SCORE:
0.7787
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1722I
TCGA-77-6842
LUSC
TCGA
LKENS
DEG_APCC_KENBOX_2
0.1111
p.R1722I
DO27413
LUSC
ICGC
LKENS
DEG_APCC_KENBOX_2
0.1111
p.G1701C
TCGA-85-8664
LUSC
TCGA
LKENS
DEG_APCC_KENBOX_2
0.0833
p.G1701C
DO45469
LUSC
ICGC
LKENS
DEG_APCC_KENBOX_2
0.0833
p.D1706Y
TCGA-AJ-A3EL
UCEC
TCGA
LKENS
DEG_APCC_KENBOX_2
0.2222
p.D1706Y
DO41542
UCEC
ICGC
LKENS
DEG_APCC_KENBOX_2
0.2222
p.P1704L
TCGA-EB-A3XF
SKCM
TCGA
LKENS
DEG_APCC_KENBOX_2
0.1667
p.P1704L
DO37437
SKCM
ICGC
LKENS
DEG_APCC_KENBOX_2
0.1667
p.P1704L
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LKENS
DEG_APCC_KENBOX_2
0.1667
p.P1704L
ACH-001127
Leukemia
CCLE
LKENS
DEG_APCC_KENBOX_2
0.1667
p.P1704L
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LKENS
DEG_APCC_KENBOX_2
0.1667
p.R1705Q
SIDM00334
Endometrial Carcinoma
GDSC
LKENS
DEG_APCC_KENBOX_2
0.1944
p.R1705Q
ACH-000879
Endometrial/Uterine Cancer
CCLE
LKENS
DEG_APCC_KENBOX_2
0.1944
p.R1705Q
MFE-296
endometrium
COSMIC
LKENS
DEG_APCC_KENBOX_2
0.1944
p.R1722S
SIDM00940
Breast Carcinoma
GDSC
LKENS
DEG_APCC_KENBOX_2
0.1111
p.R1722S
ACH-000212
Breast Cancer
CCLE
LKENS
DEG_APCC_KENBOX_2
0.1111
p.R1722S
CAL-120
breast
COSMIC
LKENS
DEG_APCC_KENBOX_2
0.1111
p.E1704K
NCI-H2347
lung
COSMIC
LKENS
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with SHROOM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28289
Tropomodulin-1
DEG_APCC_KENBOX_2
220:224
LKENS
APC,CDC20,FZR1
0.5457
More...
Q8TBJ5
Fez family zinc finger protein 2
DEG_APCC_KENBOX_2
246:250
LKENS
APC,CDC20,FZR1
0.938
More...
Q8TF72
Protein Shroom3
DEG_APCC_KENBOX_2
1710:1714
LKENS
APC,CDC20,FZR1
0.735
More...
Q9H1H9
Kinesin-like protein KIF13A
DEG_APCC_KENBOX_2
1669:1673
LKENS
APC,CDC20,FZR1
0.9972
More...
A7XYQ1
Sine oculis-binding protein homolog
DEG_APCC_KENBOX_2
77:81
LKENS
APC,CDC20,FZR1
0.9117
More...
Q5THK1
Protein PRR14L
DEG_APCC_KENBOX_2
336:340
LKENS
APC,CDC20,FZR1
0.998
More...