DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDTTS
Uniprot ID:
Q0VDD7
Source protein:
Break repair meiotic recombinase recruitment factor 1
Source gene:
BRME1
Class:
DEG_SPOP_SBC_1
Location:
503:507
E3 ligase:
SPOP
DEGRON score:
0.9727
ASA_SCORE:
79.2
COIL:
0.8176
CONS_SCORE:
0.4946
DSS_SCORE:
0.7633
HELIX:
0.165
FCONS_SCORE:
1.0566
RIG_SCORE:
0.6865
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R513Q
TCGA-39-5028
LUSC
TCGA
PDTTS
DEG_SPOP_SBC_1
0.1667
p.R513Q
DO26442
LUSC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.1667
p.Q512R
TCGA-BR-4362
STAD
TCGA
PDTTS
DEG_SPOP_SBC_1
0.1944
p.Q512R
DO38336
STAD
ICGC
PDTTS
DEG_SPOP_SBC_1
0.1944
p.P503S
TCGA-D3-A8GP
SKCM
TCGA
PDTTS
DEG_SPOP_SBC_1
0.6752
p.P503S
DO51244
SKCM
ICGC
PDTTS
DEG_SPOP_SBC_1
0.6752
p.A510T
DO227549
COCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO229013
COCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO229016
COCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO229480
LAML
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO228941
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO228945
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO230527
LUSC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO231075
LUSC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.Q500R
DO231049
LUSC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.G511R
ACH-000034
Primary
CCLE
PDTTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with BRME1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01042
Kininogen-1
DEG_SPOP_SBC_1
607:611
PDTTS
SPOP
0.9956
More...
Q00536
Cyclin-dependent kinase 16
DEG_SPOP_SBC_1
457:461
PDTTS
SPOP
0.5081
More...
Q0VDD7
Break repair meiotic recombinase recruitment factor 1
DEG_SPOP_SBC_1
503:507
PDTTS
SPOP
0.9727
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
233:237
PDTTS
SPOP
0.7817
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
241:245
PDTTS
SPOP
0.9214
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
249:253
PDTTS
SPOP
0.8155
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
257:261
PDTTS
SPOP
0.7672
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SPOP_SBC_1
970:974
PDTTS
SPOP
0.5641
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
1878:1882
PDTTS
SPOP
0.9934
More...
Q6ZRK6
Coiled-coil domain-containing protein 73
DEG_SPOP_SBC_1
965:969
PDTTS
SPOP
0.9802
More...