DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PDTTS
Uniprot ID:
Q13477
Source protein:
Mucosal addressin cell adhesion molecule 1
Source gene:
MADCAM1
Class:
DEG_SPOP_SBC_1
Location:
241:245
E3 ligase:
SPOP
DEGRON score:
0.9214
ASA_SCORE:
85.88
COIL:
0.9506
CONS_SCORE:
0.4799
DSS_SCORE:
0.9375
HELIX:
0.0198
FCONS_SCORE:
1.0082
RIG_SCORE:
0.4607
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T244I
TCGA-EE-A29E
SKCM
TCGA
PDTTS
DEG_SPOP_SBC_1
0.7078
p.E247K
TCGA-W3-AA1V
SKCM
TCGA
PDTTS
DEG_SPOP_SBC_1
0.2778
p.S240P
DO222656
BTCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.3056
p.S240P
DO51033
LAML
ICGC
PDTTS
DEG_SPOP_SBC_1
0.3056
p.P232S
DO222955
BTCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.P232S
DO229259
THCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.P232S
DO221004
WT
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO229372
BTCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO228912
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO228870
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO229028
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO229008
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO23434
LINC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO218914
SKCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.Q254P
DO229218
THCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.S248P
DO229013
COCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.S248P
DO229003
COCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.S248P
DO223098
ESCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.S248P
DO221062
WT
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.L254I
DO232861
NACA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.A240V
DO43755
UCEC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.3056
p.E247D
SIDM00694
Other Solid Cancers
GDSC
PDTTS
DEG_SPOP_SBC_1
0.2778
p.E247D
SIDM00760
Small Cell Lung Carcinoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.2778
p.P238R
SIDM00217
Colorectal Carcinoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.25
p.P238R
SNU-1040
large_intestine
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.25
p.P232L
SIDM00534
Colorectal Carcinoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.P232L
ACH-000986
Colon/Colorectal Cancer
CCLE
PDTTS
DEG_SPOP_SBC_1
0.0833
p.P232L
HT-115
large_intestine
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.S240F
ACH-001057
Lymphoma
CCLE
PDTTS
DEG_SPOP_SBC_1
0.3056
p.E255K
ACH-001569
Skin Cancer
CCLE
PDTTS
DEG_SPOP_SBC_1
0.0556
p.A248V
UDSCC2
upper_aerodigestive_tract
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.25
p.P254R
SNU-1040
large_intestine
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.0833
p.P248L
HT-115
large_intestine
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.25
p.P240L
HT-115
large_intestine
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.3056
p.P246R
SNU-1040
large_intestine
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with MADCAM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01042
Kininogen-1
DEG_SPOP_SBC_1
607:611
PDTTS
SPOP
0.9956
More...
Q00536
Cyclin-dependent kinase 16
DEG_SPOP_SBC_1
457:461
PDTTS
SPOP
0.5081
More...
Q0VDD7
Break repair meiotic recombinase recruitment factor 1
DEG_SPOP_SBC_1
503:507
PDTTS
SPOP
0.9727
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
233:237
PDTTS
SPOP
0.7817
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
241:245
PDTTS
SPOP
0.9214
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
249:253
PDTTS
SPOP
0.8155
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
257:261
PDTTS
SPOP
0.7672
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SPOP_SBC_1
970:974
PDTTS
SPOP
0.5641
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
1878:1882
PDTTS
SPOP
0.9934
More...
Q6ZRK6
Coiled-coil domain-containing protein 73
DEG_SPOP_SBC_1
965:969
PDTTS
SPOP
0.9802
More...