DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PDTTS
Uniprot ID:
Q6ZRK6
Source protein:
Coiled-coil domain-containing protein 73
Source gene:
CCDC73
Class:
DEG_SPOP_SBC_1
Location:
965:969
E3 ligase:
SPOP
DEGRON score:
0.9802
ASA_SCORE:
74.84
COIL:
0.74
CONS_SCORE:
0.4948
DSS_SCORE:
0.4574
HELIX:
0.2052
FCONS_SCORE:
1.1432
RIG_SCORE:
0.7493
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D962N
TCGA-38-4625
LUAD
TCGA
PDTTS
DEG_SPOP_SBC_1
0.25
p.D962N
DO23952
LUAD
ICGC
PDTTS
DEG_SPOP_SBC_1
0.25
p.D975E
TCGA-63-A5MN
LUSC
TCGA
PDTTS
DEG_SPOP_SBC_1
0.1667
p.D975E
DO219155
LUSC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.1667
p.L977F
TCGA-G2-A3VY
BLCA
TCGA
PDTTS
DEG_SPOP_SBC_1
0.1111
p.L977F
DO590
BLCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.1111
p.P965L
TCGA-XF-A9T8
BLCA
TCGA
PDTTS
DEG_SPOP_SBC_1
0.7582
p.P965L
DO51927
BLCA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.7582
p.N971K
DO229045
LICA
ICGC
PDTTS
DEG_SPOP_SBC_1
0.2778
p.N971K
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.2778
p.N971K
ACH-000929
Lung Cancer
CCLE
PDTTS
DEG_SPOP_SBC_1
0.2778
p.N971K
NCI-H2110
lung
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.2778
p.N971S
DO224638
LUSC
ICGC
PDTTS
DEG_SPOP_SBC_1
0.2778
p.G964R
SIDM00545
Melanoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.3056
p.G964R
ACH-000987
Skin Cancer
CCLE
PDTTS
DEG_SPOP_SBC_1
0.3056
p.G964R
Mewo
skin
COSMIC
PDTTS
DEG_SPOP_SBC_1
0.3056
p.V959G
SIDM00007
Other Solid Cancers
GDSC
PDTTS
DEG_SPOP_SBC_1
0.1667
p.V959G
SIDM00244
Neuroblastoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.1667
p.V959G
SIDM00049
Colorectal Carcinoma
GDSC
PDTTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with CCDC73 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01042
Kininogen-1
DEG_SPOP_SBC_1
607:611
PDTTS
SPOP
0.9956
More...
Q00536
Cyclin-dependent kinase 16
DEG_SPOP_SBC_1
457:461
PDTTS
SPOP
0.5081
More...
Q0VDD7
Break repair meiotic recombinase recruitment factor 1
DEG_SPOP_SBC_1
503:507
PDTTS
SPOP
0.9727
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
233:237
PDTTS
SPOP
0.7817
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
241:245
PDTTS
SPOP
0.9214
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
249:253
PDTTS
SPOP
0.8155
More...
Q13477
Mucosal addressin cell adhesion molecule 1
DEG_SPOP_SBC_1
257:261
PDTTS
SPOP
0.7672
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SPOP_SBC_1
970:974
PDTTS
SPOP
0.5641
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
1878:1882
PDTTS
SPOP
0.9934
More...
Q6ZRK6
Coiled-coil domain-containing protein 73
DEG_SPOP_SBC_1
965:969
PDTTS
SPOP
0.9802
More...