DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PHSTS
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SPOP_SBC_1
Location:
2975:2979
E3 ligase:
SPOP
DEGRON score:
0.9883
ASA_SCORE:
82.16
COIL:
0.7816
CONS_SCORE:
0.5076
DSS_SCORE:
0.5005
HELIX:
0.02
FCONS_SCORE:
1.1538
RIG_SCORE:
0.7293
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G2970V
TCGA-56-7823
LUSC
TCGA
PHSTS
DEG_SPOP_SBC_1
0.1944
p.G2970V
DO223721
LUSC
ICGC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.A2980S
TCGA-AG-A00Y
READ
TCGA
PHSTS
DEG_SPOP_SBC_1
0.3056
p.A2980S
DO36542
READ
ICGC
PHSTS
DEG_SPOP_SBC_1
0.3056
p.A2980D
TCGA-AG-A00Y
READ
TCGA
PHSTS
DEG_SPOP_SBC_1
0.3056
p.A2980D
DO36542
READ
ICGC
PHSTS
DEG_SPOP_SBC_1
0.3056
p.V2986I
TCGA-E6-A1LX
UCEC
TCGA
PHSTS
DEG_SPOP_SBC_1
0.1389
p.V2986I
DO41020
UCEC
ICGC
PHSTS
DEG_SPOP_SBC_1
0.1389
p.E2965K
TCGA-EE-A29M
SKCM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.0556
p.E2965K
DO37404
SKCM
ICGC
PHSTS
DEG_SPOP_SBC_1
0.0556
p.S2977Y
TCGA-EE-A2GT
SKCM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.712
p.S2977Y
DO37946
SKCM
ICGC
PHSTS
DEG_SPOP_SBC_1
0.712
p.A2971T
DO222570
ESCA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.2222
p.G2970D
DO50970
LICA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.T2983I
DO220878
MELA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.2222
p.Q2973H
SIDM00155
Head and Neck Carcinoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.2778
p.Q2973H
PCI-38
upper_aerodigestive_tract
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.2778
p.G2970S
SIDM00045
Gastric Carcinoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.G2970S
ACH-002141
Gastric Cancer
CCLE
PHSTS
DEG_SPOP_SBC_1
0.1944
p.G2970S
HSC-39
stomach
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2975:2979
PHSTS
SPOP
0.9883
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
379:383
PHSTS
SPOP
0.8054
More...
Q5T011
KICSTOR complex protein SZT2
DEG_SPOP_SBC_1
874:878
PHSTS
SPOP
0.9468
More...
Q8HWS3
DNA-binding protein RFX6
DEG_SPOP_SBC_1
711:715
PHSTS
SPOP
0.9944
More...
Q8NG27
E3 ubiquitin-protein ligase Praja-1
DEG_SPOP_SBC_1
284:288
PHSTS
SPOP
0.7228
More...
Q9P2P5
E3 ubiquitin-protein ligase HECW2
DEG_SPOP_SBC_1
905:909
PHSTS
SPOP
0.9068
More...