DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PHSTS
Uniprot ID:
Q8NG27
Source protein:
E3 ubiquitin-protein ligase Praja-1
Source gene:
PJA1
Class:
DEG_SPOP_SBC_1
Location:
284:288
E3 ligase:
SPOP
DEGRON score:
0.7228
ASA_SCORE:
70.96
COIL:
0.7208
CONS_SCORE:
0.2581
DSS_SCORE:
0.6137
HELIX:
0.2104
FCONS_SCORE:
0.9117
RIG_SCORE:
0.6781
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H285R
TCGA-06-5416
GBM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.7133
p.D281N
TCGA-AX-A1CE
UCEC
TCGA
PHSTS
DEG_SPOP_SBC_1
0.25
p.M283V
TCGA-CD-A4MG
STAD
TCGA
PHSTS
DEG_SPOP_SBC_1
0.3056
p.D281E
TCGA-DF-A2KU
UCEC
TCGA
PHSTS
DEG_SPOP_SBC_1
0.25
p.W290L
TCGA-EE-A2A5
SKCM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.2778
p.D282N
TCGA-FI-A2D5
UCEC
TCGA
PHSTS
DEG_SPOP_SBC_1
0.2778
p.H285L
TCGA-KL-8326
KICH
TCGA
PHSTS
DEG_SPOP_SBC_1
0.6202
p.R288C
DO51863
BLCA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.8301
p.R288H
DO51634
CESC
ICGC
PHSTS
DEG_SPOP_SBC_1
0.8244
p.R288H
DO8224
COAD
ICGC
PHSTS
DEG_SPOP_SBC_1
0.8244
p.T297M
DO233941
GACA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.0833
p.T297M
DO41638
UCEC
ICGC
PHSTS
DEG_SPOP_SBC_1
0.0833
p.R288L
DO50917
LICA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.8428
p.M290L
DO24307
LUAD
ICGC
PHSTS
DEG_SPOP_SBC_1
0.2778
p.P284S
DO23818
LUAD
ICGC
PHSTS
DEG_SPOP_SBC_1
0.6752
p.R287Q
DO47282
SKCM
ICGC
PHSTS
DEG_SPOP_SBC_1
0.7329
p.P284L
DO42568
UCEC
ICGC
PHSTS
DEG_SPOP_SBC_1
0.7582
p.D279V
SIDM00423
B-Cell Non-Hodgkin's Lymphoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.D279V
ACH-000656
Lymphoma
CCLE
PHSTS
DEG_SPOP_SBC_1
0.1944
p.D279V
SU-DHL-8
NS
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.S286N
SIDM01126
Small Cell Lung Carcinoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.7069
p.S286N
ACH-001599
Lung Cancer
CCLE
PHSTS
DEG_SPOP_SBC_1
0.7069
p.S286N
NCI-H64
lung
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.7069
p.D281A
SIDM01100
Neuroblastoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.25
p.D281A
ACH-000366
Neuroblastoma
CCLE
PHSTS
DEG_SPOP_SBC_1
0.25
p.D281A
SK-N-DZ
autonomic_ganglia
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.25
p.P298H
LU-139
lung
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.0556
p.P293H
SNU-182
liver
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with PJA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2975:2979
PHSTS
SPOP
0.9883
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
379:383
PHSTS
SPOP
0.8054
More...
Q5T011
KICSTOR complex protein SZT2
DEG_SPOP_SBC_1
874:878
PHSTS
SPOP
0.9468
More...
Q8HWS3
DNA-binding protein RFX6
DEG_SPOP_SBC_1
711:715
PHSTS
SPOP
0.9944
More...
Q8NG27
E3 ubiquitin-protein ligase Praja-1
DEG_SPOP_SBC_1
284:288
PHSTS
SPOP
0.7228
More...
Q9P2P5
E3 ubiquitin-protein ligase HECW2
DEG_SPOP_SBC_1
905:909
PHSTS
SPOP
0.9068
More...