DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PHSTS
Uniprot ID:
Q8HWS3
Source protein:
DNA-binding protein RFX6
Source gene:
RFX6
Class:
DEG_SPOP_SBC_1
Location:
711:715
E3 ligase:
SPOP
DEGRON score:
0.9944
ASA_SCORE:
72.72
COIL:
0.9104
CONS_SCORE:
0.3377
DSS_SCORE:
0.4607
HELIX:
0.0368
FCONS_SCORE:
1.1609
RIG_SCORE:
0.6235
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V706M
TCGA-AZ-6601
COAD
TCGA
PHSTS
DEG_SPOP_SBC_1
0.1944
p.V706M
DO8119
COAD
ICGC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.H720Y
TCGA-ER-A19F
SKCM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.1944
p.H720Y
DO37679
SKCM
ICGC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.H720Y
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.H720Y
ACH-000951
Lung Cancer
CCLE
PHSTS
DEG_SPOP_SBC_1
0.1944
p.H720Y
NCI-H2342
lung
COSMIC
PHSTS
DEG_SPOP_SBC_1
0.1944
p.R708M
TCGA-OL-A6VO
BRCA
TCGA
PHSTS
DEG_SPOP_SBC_1
0.25
p.R708M
DO51213
BRCA
ICGC
PHSTS
DEG_SPOP_SBC_1
0.25
p.S715L
TCGA-W3-A824
SKCM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.7667
p.S715L
DO51271
SKCM
ICGC
PHSTS
DEG_SPOP_SBC_1
0.7667
p.L717F
TCGA-YD-A9TA
SKCM
TCGA
PHSTS
DEG_SPOP_SBC_1
0.2778
p.L717F
DO219503
SKCM
ICGC
PHSTS
DEG_SPOP_SBC_1
0.2778
p.E723K
SIDM01608
Endometrial Carcinoma
GDSC
PHSTS
DEG_SPOP_SBC_1
0.1111
p.E723K
ACH-000990
Endometrial/Uterine Cancer
CCLE
PHSTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with RFX6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
2975:2979
PHSTS
SPOP
0.9883
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
379:383
PHSTS
SPOP
0.8054
More...
Q5T011
KICSTOR complex protein SZT2
DEG_SPOP_SBC_1
874:878
PHSTS
SPOP
0.9468
More...
Q8HWS3
DNA-binding protein RFX6
DEG_SPOP_SBC_1
711:715
PHSTS
SPOP
0.9944
More...
Q8NG27
E3 ubiquitin-protein ligase Praja-1
DEG_SPOP_SBC_1
284:288
PHSTS
SPOP
0.7228
More...
Q9P2P5
E3 ubiquitin-protein ligase HECW2
DEG_SPOP_SBC_1
905:909
PHSTS
SPOP
0.9068
More...