DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKTTS
Uniprot ID:
Q13029
Source protein:
PR domain zinc finger protein 2
Source gene:
PRDM2
Class:
DEG_SPOP_SBC_1
Location:
323:327
E3 ligase:
SPOP
DEGRON score:
0.8843
ASA_SCORE:
85.26
COIL:
0.8444
CONS_SCORE:
0.379
DSS_SCORE:
0.729
HELIX:
0.0982
FCONS_SCORE:
1.2388
RIG_SCORE:
0.661
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E332Q
TCGA-D8-A1JA
BRCA
TCGA
PKTTS
DEG_SPOP_SBC_1
0.1944
p.E332Q
DO2819
BRCA
ICGC
PKTTS
DEG_SPOP_SBC_1
0.1944
p.E336V
TCGA-IN-AB1X
STAD
TCGA
PKTTS
DEG_SPOP_SBC_1
0.0833
p.E314K
TCGA-PE-A5DD
BRCA
TCGA
PKTTS
DEG_SPOP_SBC_1
0.0833
p.E314K
DO219642
BRCA
ICGC
PKTTS
DEG_SPOP_SBC_1
0.0833
p.E322Q
DO2401
BRCA
ICGC
PKTTS
DEG_SPOP_SBC_1
0.3056
p.E321Q
DO38475
STAD
ICGC
PKTTS
DEG_SPOP_SBC_1
0.2778
p.A330V
DO38404
STAD
ICGC
PKTTS
DEG_SPOP_SBC_1
0.25
p.T333A
DO47867
STAD
ICGC
PKTTS
DEG_SPOP_SBC_1
0.1667
p.R315W
DO41584
UCEC
ICGC
PKTTS
DEG_SPOP_SBC_1
0.2222
p.T325I
SIDM00562
Breast Carcinoma
GDSC
PKTTS
DEG_SPOP_SBC_1
0.7078
p.T325I
ACH-002163
Breast Cancer
CCLE
PKTTS
DEG_SPOP_SBC_1
0.7078
p.T325I
MRK-nu-1
breast
COSMIC
PKTTS
DEG_SPOP_SBC_1
0.7078
p.L319V
SIDM01611
Endometrial Carcinoma
GDSC
PKTTS
DEG_SPOP_SBC_1
0.2222
p.L319V
ACH-000996
Endometrial/Uterine Cancer
CCLE
PKTTS
DEG_SPOP_SBC_1
0.2222
p.L320F
COLO-679
skin
COSMIC
PKTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with PRDM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43586
Proline-serine-threonine phosphatase-interacting protein 1
DEG_SPOP_SBC_1
319:323
PKTTS
SPOP
0.9895
More...
O75534
Cold shock domain-containing protein E1
DEG_SPOP_SBC_1
441:445
PKTTS
SPOP
0.8677
More...
P53814
Smoothelin
DEG_SPOP_SBC_1
241:245
PKTTS
SPOP
0.9335
More...
Q13029
PR domain zinc finger protein 2
DEG_SPOP_SBC_1
323:327
PKTTS
SPOP
0.8843
More...
Q8N131
Porimin
DEG_SPOP_SBC_1
116:120
PKTTS
SPOP
0.9855
More...
Q86UU1
Pleckstrin homology-like domain family B member 1
DEG_SPOP_SBC_1
904:908
PKTTS
SPOP
0.9776
More...