DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PRTTT
Uniprot ID:
Q76N32
Source protein:
Centrosomal protein of 68 kDa
Source gene:
CEP68
Class:
DEG_SPOP_SBC_1
Location:
138:142
E3 ligase:
SPOP
DEGRON score:
0.6495
ASA_SCORE:
92.48
COIL:
0.895
CONS_SCORE:
0.4684
DSS_SCORE:
0.5535
HELIX:
0.0266
FCONS_SCORE:
0.9105
RIG_SCORE:
0.7021
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A149D
TCGA-AP-A059
UCEC
TCGA
PRTTT
DEG_SPOP_SBC_1
0.1389
p.A149D
DO41361
UCEC
ICGC
PRTTT
DEG_SPOP_SBC_1
0.1389
p.T141A
TCGA-FD-A43N
BLCA
TCGA
PRTTT
DEG_SPOP_SBC_1
0.7139
p.T141A
DO502
BLCA
ICGC
PRTTT
DEG_SPOP_SBC_1
0.7139
p.E129K
DO229480
LAML
ICGC
PRTTT
DEG_SPOP_SBC_1
0.0833
p.E129K
SIDM00781
Colorectal Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.0833
p.E129K
SIDM00780
Colorectal Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.0833
p.E129K
SIDM01753
Gastric Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.0833
p.T140R
SIDM00922
Non-Small Cell Lung Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00078
Oral Cavity Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00426
Rhabdomyosarcoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00885
Breast Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00820
Kidney Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00445
Esophageal Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00874
Breast Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00085
Glioma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00847
Rhabdomyosarcoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00814
Other Solid Cancers
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM01229
Neuroblastoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T140R
SIDM00100
Mesothelioma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7876
p.T142A
SIDM00523
Small Cell Lung Carcinoma
GDSC
PRTTT
DEG_SPOP_SBC_1
0.7139
p.T142A
ACH-000698
Lung Cancer
CCLE
PRTTT
DEG_SPOP_SBC_1
0.7139
p.T142A
DMS-53
lung
COSMIC
PRTTT
DEG_SPOP_SBC_1
0.7139
p.S136R
NCI-H446
lung
COSMIC
PRTTT
DEG_SPOP_SBC_1
0.7222
p.S141Y
NH-12
autonomic_ganglia
COSMIC
PRTTT
DEG_SPOP_SBC_1
0.712
Drug responses associated with CEP68 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00743
Serine/threonine-protein phosphatase 6 catalytic subunit
DEG_SPOP_SBC_1
297:301
PRTTT
SPOP
0.843
More...
O14490
Disks large-associated protein 1
DEG_SPOP_SBC_1
547:551
PRTTT
SPOP
0.9897
More...
P11586
C-1-tetrahydrofolate synthase, cytoplasmic
DEG_SPOP_SBC_1
73:77
PRTTT
SPOP
0.9103
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
4130:4134
PRTTT
SPOP
0.638
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
158:162
PRTTT
SPOP
0.8778
More...
Q76N32
Centrosomal protein of 68 kDa
DEG_SPOP_SBC_1
138:142
PRTTT
SPOP
0.6495
More...