DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPPS
Uniprot ID:
O95400
Source protein:
CD2 antigen cytoplasmic tail-binding protein 2
Source gene:
CD2BP2
Class:
DEG_SCF_FBW7_1
Location:
242:247
E3 ligase:
FBXW7
DEGRON score:
0.9792
ASA_SCORE:
77.8667
COIL:
0.9215
CONS_SCORE:
0.2545
DSS_SCORE:
0.7088
HELIX:
0.061
FCONS_SCORE:
0.777
RIG_SCORE:
0.5904
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S247P
TCGA-BR-6452
STAD
TCGA
PTPPPS
DEG_SCF_FBW7_1
0.7863
p.S247P
DO38404
STAD
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.7863
p.P242L
TCGA-MP-A4TK
LUAD
TCGA
PTPPPS
DEG_SCF_FBW7_1
0.6471
p.P242L
DO45384
LUAD
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.6471
p.A256V
DO233127
GACA
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.0833
p.A256E
DO229035
LICA
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.0833
p.P239L
DO232761
PBCA
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.25
p.P246S
SIDM01387
Small Cell Lung Carcinoma
GDSC
PTPPPS
DEG_SCF_FBW7_1
0.5641
p.P246S
ACH-000921
Lung Cancer
CCLE
PTPPPS
DEG_SCF_FBW7_1
0.5641
Drug responses associated with CD2BP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95400
CD2 antigen cytoplasmic tail-binding protein 2
DEG_SCF_FBW7_1
242:247
PTPPPS
FBXW7
0.9792
More...
Q16204
Coiled-coil domain-containing protein 6
DEG_SCF_FBW7_1
426:431
PTPPPS
FBXW7
0.9778
More...
Q8IWN7
Retinitis pigmentosa 1-like 1 protein
DEG_SCF_FBW7_1
2277:2282
PTPPPS
FBXW7
0.9965
More...
Q8NEM7
Transcription factor SPT20 homolog
DEG_SCF_FBW7_1
493:498
PTPPPS
FBXW7
0.9821
More...
Q9HC35
Echinoderm microtubule-associated protein-like 4
DEG_SCF_FBW7_1
898:903
PTPPPS
FBXW7
0.9906
More...
Q5VZ46
Uncharacterized protein KIAA1614
DEG_SCF_FBW7_1
808:813
PTPPPS
FBXW7
0.9846
More...