DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPPS
Uniprot ID:
Q8NEM7
Source protein:
Transcription factor SPT20 homolog
Source gene:
SUPT20H
Class:
DEG_SCF_FBW7_1
Location:
493:498
E3 ligase:
FBXW7
DEGRON score:
0.9821
ASA_SCORE:
98.2333
COIL:
0.9797
CONS_SCORE:
0.4925
DSS_SCORE:
0.7178
HELIX:
0.0082
FCONS_SCORE:
1.0726
RIG_SCORE:
0.5202
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P497S
TCGA-A6-2686
COAD
TCGA
PTPPPS
DEG_SCF_FBW7_1
0.5641
p.P497S
TCGA-AP-A054
UCEC
TCGA
PTPPPS
DEG_SCF_FBW7_1
0.5641
p.P497S
TCGA-F1-6177
STAD
TCGA
PTPPPS
DEG_SCF_FBW7_1
0.5641
p.P498S
DO7828
COAD
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.6752
p.P498S
DO233737
GACA
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.6752
p.P498S
DO38727
STAD
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.6752
p.P498S
DO42256
UCEC
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.6752
p.S488G
DO23296
LINC
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.1944
p.S488R
DO45221
LIRI
ICGC
PTPPPS
DEG_SCF_FBW7_1
0.1944
p.S503R
SIDM00789
Colorectal Carcinoma
GDSC
PTPPPS
DEG_SCF_FBW7_1
0.6389
p.S503R
ACH-000997
Colon/Colorectal Cancer
CCLE
PTPPPS
DEG_SCF_FBW7_1
0.6389
p.S503R
ACH-001061
Colon/Colorectal Cancer
CCLE
PTPPPS
DEG_SCF_FBW7_1
0.6389
p.S503R
HCT-15
large_intestine
COSMIC
PTPPPS
DEG_SCF_FBW7_1
0.6389
p.K500T
SIDM01451
Pancreatic Carcinoma
GDSC
PTPPPS
DEG_SCF_FBW7_1
0.2778
p.K500T
ACH-000933
Pancreatic Cancer
CCLE
PTPPPS
DEG_SCF_FBW7_1
0.2778
p.S504R
HCT-15
large_intestine
COSMIC
PTPPPS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with SUPT20H mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95400
CD2 antigen cytoplasmic tail-binding protein 2
DEG_SCF_FBW7_1
242:247
PTPPPS
FBXW7
0.9792
More...
Q16204
Coiled-coil domain-containing protein 6
DEG_SCF_FBW7_1
426:431
PTPPPS
FBXW7
0.9778
More...
Q8IWN7
Retinitis pigmentosa 1-like 1 protein
DEG_SCF_FBW7_1
2277:2282
PTPPPS
FBXW7
0.9965
More...
Q8NEM7
Transcription factor SPT20 homolog
DEG_SCF_FBW7_1
493:498
PTPPPS
FBXW7
0.9821
More...
Q9HC35
Echinoderm microtubule-associated protein-like 4
DEG_SCF_FBW7_1
898:903
PTPPPS
FBXW7
0.9906
More...
Q5VZ46
Uncharacterized protein KIAA1614
DEG_SCF_FBW7_1
808:813
PTPPPS
FBXW7
0.9846
More...