DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PTTTT
Uniprot ID:
O14827
Source protein:
Ras-specific guanine nucleotide-releasing factor 2
Source gene:
RASGRF2
Class:
DEG_SPOP_SBC_1
Location:
766:770
E3 ligase:
SPOP
DEGRON score:
0.952
ASA_SCORE:
98.4
COIL:
0.9594
CONS_SCORE:
0.3059
DSS_SCORE:
0.7511
HELIX:
0.0222
FCONS_SCORE:
0.8734
RIG_SCORE:
0.5953
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A775V
TCGA-2Y-A9H3
LIHC
TCGA
PTTTT
DEG_SPOP_SBC_1
0.1944
p.A775V
DO219525
LIHC
ICGC
PTTTT
DEG_SPOP_SBC_1
0.1944
p.A775V
SIDM01145
Gastric Carcinoma
GDSC
PTTTT
DEG_SPOP_SBC_1
0.1944
p.A775V
SIDM00383
Gastric Carcinoma
GDSC
PTTTT
DEG_SPOP_SBC_1
0.1944
p.A775V
SIDM00164
Biliary Tract Carcinoma
GDSC
PTTTT
DEG_SPOP_SBC_1
0.1944
p.S764N
TCGA-AX-A1C5
UCEC
TCGA
PTTTT
DEG_SPOP_SBC_1
0.2778
p.S764N
DO41422
UCEC
ICGC
PTTTT
DEG_SPOP_SBC_1
0.2778
p.S776A
TCGA-AY-6197
COAD
TCGA
PTTTT
DEG_SPOP_SBC_1
0.6111
p.S776A
DO9956
COAD
ICGC
PTTTT
DEG_SPOP_SBC_1
0.6111
p.S763A
TCGA-B5-A1MR
UCEC
TCGA
PTTTT
DEG_SPOP_SBC_1
0.25
p.S763A
DO41758
UCEC
ICGC
PTTTT
DEG_SPOP_SBC_1
0.25
p.D759A
SIDM01007
T-Lymphoblastic Leukemia
GDSC
PTTTT
DEG_SPOP_SBC_1
0.1389
p.D759A
ACH-002256
Leukemia
CCLE
PTTTT
DEG_SPOP_SBC_1
0.1389
p.D759A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PTTTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with RASGRF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
868:872
PTTTT
SPOP
0.8591
More...
O14827
Ras-specific guanine nucleotide-releasing factor 2
DEG_SPOP_SBC_1
766:770
PTTTT
SPOP
0.952
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1969:1973
PTTTT
SPOP
0.8395
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1453:1457
PTTTT
SPOP
0.9453
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1461:1465
PTTTT
SPOP
0.9939
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
402:406
PTTTT
SPOP
0.9031
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4625:4629
PTTTT
SPOP
0.7011
More...
Q9ULP0
Protein NDRG4
DEG_SPOP_SBC_1
252:256
PTTTT
SPOP
0.5892
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
475:479
PTTTT
SPOP
0.8956
More...