DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PTTTT
Uniprot ID:
Q4ZHG4
Source protein:
Fibronectin type III domain-containing protein 1
Source gene:
FNDC1
Class:
DEG_SPOP_SBC_1
Location:
1453:1457
E3 ligase:
SPOP
DEGRON score:
0.9453
ASA_SCORE:
97.58
COIL:
0.9616
CONS_SCORE:
0.4935
DSS_SCORE:
0.8141
HELIX:
0.0112
FCONS_SCORE:
0.7759
RIG_SCORE:
0.6852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1466L
TCGA-DG-A2KK
CESC
TCGA
PTTTT
DEG_SPOP_SBC_1
0.0833
p.R1456Q
DO227990
COCA
ICGC
PTTTT
DEG_SPOP_SBC_1
0.7329
p.R1456Q
DO42280
UCEC
ICGC
PTTTT
DEG_SPOP_SBC_1
0.7329
p.R1456W
DO224708
COCA
ICGC
PTTTT
DEG_SPOP_SBC_1
0.8634
p.D1458N
DO36556
READ
ICGC
PTTTT
DEG_SPOP_SBC_1
0.3056
p.T1443N
SIDM00534
Colorectal Carcinoma
GDSC
PTTTT
DEG_SPOP_SBC_1
0.0556
p.T1443N
ACH-000986
Colon/Colorectal Cancer
CCLE
PTTTT
DEG_SPOP_SBC_1
0.0556
p.T1443N
HT-115
large_intestine
COSMIC
PTTTT
DEG_SPOP_SBC_1
0.0556
Drug responses associated with FNDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
868:872
PTTTT
SPOP
0.8591
More...
O14827
Ras-specific guanine nucleotide-releasing factor 2
DEG_SPOP_SBC_1
766:770
PTTTT
SPOP
0.952
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1969:1973
PTTTT
SPOP
0.8395
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1453:1457
PTTTT
SPOP
0.9453
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1461:1465
PTTTT
SPOP
0.9939
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
402:406
PTTTT
SPOP
0.9031
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4625:4629
PTTTT
SPOP
0.7011
More...
Q9ULP0
Protein NDRG4
DEG_SPOP_SBC_1
252:256
PTTTT
SPOP
0.5892
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
475:479
PTTTT
SPOP
0.8956
More...