DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTTTT
Uniprot ID:
Q5T6F2
Source protein:
Ubiquitin-associated protein 2
Source gene:
UBAP2
Class:
DEG_SPOP_SBC_1
Location:
402:406
E3 ligase:
SPOP
DEGRON score:
0.9031
ASA_SCORE:
87.2
COIL:
0.9276
CONS_SCORE:
0.3713
DSS_SCORE:
0.6769
HELIX:
0.0488
FCONS_SCORE:
0.8413
RIG_SCORE:
0.6599
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T394A
DO233831
GACA
ICGC
PTTTT
DEG_SPOP_SBC_1
0.1111
p.Q396K
DO229045
LICA
ICGC
PTTTT
DEG_SPOP_SBC_1
0.1667
p.T414A
SIDM00748
Non-Small Cell Lung Carcinoma
GDSC
PTTTT
DEG_SPOP_SBC_1
0.1111
p.T414A
ACH-000015
Lung Cancer
CCLE
PTTTT
DEG_SPOP_SBC_1
0.1111
p.T414A
NCI-H1581
lung
COSMIC
PTTTT
DEG_SPOP_SBC_1
0.1111
p.S407T
ACH-000279
Bone Cancer
CCLE
PTTTT
DEG_SPOP_SBC_1
0.3056
p.S398N
ACH-001295
Eye Cancer
CCLE
PTTTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with UBAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
868:872
PTTTT
SPOP
0.8591
More...
O14827
Ras-specific guanine nucleotide-releasing factor 2
DEG_SPOP_SBC_1
766:770
PTTTT
SPOP
0.952
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1969:1973
PTTTT
SPOP
0.8395
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1453:1457
PTTTT
SPOP
0.9453
More...
Q4ZHG4
Fibronectin type III domain-containing protein 1
DEG_SPOP_SBC_1
1461:1465
PTTTT
SPOP
0.9939
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
402:406
PTTTT
SPOP
0.9031
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4625:4629
PTTTT
SPOP
0.7011
More...
Q9ULP0
Protein NDRG4
DEG_SPOP_SBC_1
252:256
PTTTT
SPOP
0.5892
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
475:479
PTTTT
SPOP
0.8956
More...