DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SKENG
Uniprot ID:
Q8IX12
Source protein:
Cell division cycle and apoptosis regulator protein 1
Source gene:
CCAR1
Class:
DEG_APCC_KENBOX_2
Location:
1143:1147
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9857
ASA_SCORE:
99.06
COIL:
0.5738
CONS_SCORE:
0.2822
DSS_SCORE:
0.8435
HELIX:
0.3988
FCONS_SCORE:
1.0644
RIG_SCORE:
0.6463
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1141K
TCGA-BR-8680
STAD
TCGA
SKENG
DEG_APCC_KENBOX_2
0.2778
p.Q1141K
DO47769
STAD
ICGC
SKENG
DEG_APCC_KENBOX_2
0.2778
p.K1135N
TCGA-XF-A9T5
BLCA
TCGA
SKENG
DEG_APCC_KENBOX_2
0.2222
p.K1135N
DO51925
BLCA
ICGC
SKENG
DEG_APCC_KENBOX_2
0.2222
p.A1148S
DO229008
LICA
ICGC
SKENG
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with CCAR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_APCC_KENBOX_2
1228:1232
SKENG
APC,CDC20,FZR1
0.8615
More...
P35251
Replication factor C subunit 1
DEG_APCC_KENBOX_2
125:129
SKENG
APC,CDC20,FZR1
0.9622
More...
Q12908
Ileal sodium/bile acid cotransporter
DEG_APCC_KENBOX_2
325:329
SKENG
APC,CDC20,FZR1
0.6472
More...
Q13596
Sorting nexin-1
DEG_APCC_KENBOX_2
72:76
SKENG
APC,CDC20,FZR1
0.924
More...
Q8IX12
Cell division cycle and apoptosis regulator protein 1
DEG_APCC_KENBOX_2
1143:1147
SKENG
APC,CDC20,FZR1
0.9857
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1430:1434
SKENG
APC,CDC20,FZR1
0.9942
More...