DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SKENG
Uniprot ID:
Q8NFA0
Source protein:
Ubiquitin carboxyl-terminal hydrolase 32
Source gene:
USP32
Class:
DEG_APCC_KENBOX_2
Location:
1430:1434
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9942
ASA_SCORE:
88.72
COIL:
0.6768
CONS_SCORE:
0.2223
DSS_SCORE:
0.4767
HELIX:
0.2894
FCONS_SCORE:
1.1385
RIG_SCORE:
0.6509
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1440Q
TCGA-85-A4JC
LUSC
TCGA
SKENG
DEG_APCC_KENBOX_2
0.1667
p.E1440Q
DO45429
LUSC
ICGC
SKENG
DEG_APCC_KENBOX_2
0.1667
p.N1433Y
TCGA-CR-7370
HNSC
TCGA
SKENG
DEG_APCC_KENBOX_2
0.7059
p.N1433Y
DO14426
HNSC
ICGC
SKENG
DEG_APCC_KENBOX_2
0.7059
p.A1429V
SIDM01129
Small Cell Lung Carcinoma
GDSC
SKENG
DEG_APCC_KENBOX_2
0.3056
p.A1429V
ACH-000816
Lung Cancer
CCLE
SKENG
DEG_APCC_KENBOX_2
0.3056
p.A1429V
NCI-H524
lung
COSMIC
SKENG
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with USP32 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35125
Ubiquitin carboxyl-terminal hydrolase 6
DEG_APCC_KENBOX_2
1228:1232
SKENG
APC,CDC20,FZR1
0.8615
More...
P35251
Replication factor C subunit 1
DEG_APCC_KENBOX_2
125:129
SKENG
APC,CDC20,FZR1
0.9622
More...
Q12908
Ileal sodium/bile acid cotransporter
DEG_APCC_KENBOX_2
325:329
SKENG
APC,CDC20,FZR1
0.6472
More...
Q13596
Sorting nexin-1
DEG_APCC_KENBOX_2
72:76
SKENG
APC,CDC20,FZR1
0.924
More...
Q8IX12
Cell division cycle and apoptosis regulator protein 1
DEG_APCC_KENBOX_2
1143:1147
SKENG
APC,CDC20,FZR1
0.9857
More...
Q8NFA0
Ubiquitin carboxyl-terminal hydrolase 32
DEG_APCC_KENBOX_2
1430:1434
SKENG
APC,CDC20,FZR1
0.9942
More...