DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SKENI
Uniprot ID:
Q9NYB5
Source protein:
Solute carrier organic anion transporter family member 1C1
Source gene:
SLCO1C1
Class:
DEG_APCC_KENBOX_2
Location:
5:9
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9756
ASA_SCORE:
109.66
COIL:
0.7568
CONS_SCORE:
0.4081
DSS_SCORE:
0.6488
HELIX:
0.2386
FCONS_SCORE:
1.225
RIG_SCORE:
0.747
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P19L
TCGA-34-7107
LUSC
TCGA
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19L
DO26449
LUSC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19T
TCGA-DD-AADG
LIHC
TCGA
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19T
DO219571
LIHC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19S
TCGA-EE-A2GC
SKCM
TCGA
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19S
DO37839
SKCM
ICGC
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19H
TCGA-FI-A2D5
UCEC
TCGA
SKENI
DEG_APCC_KENBOX_2
0.0556
p.P19H
DO41331
UCEC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.0556
p.E7G
TCGA-W3-AA1V
SKCM
TCGA
SKENI
DEG_APCC_KENBOX_2
0.7199
p.E7G
DO51276
SKCM
ICGC
SKENI
DEG_APCC_KENBOX_2
0.7199
p.L6V
DO49800
BLCA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.6765
p.F14S
DO598
BLCA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.3056
p.E16D
DO8264
COAD
ICGC
SKENI
DEG_APCC_KENBOX_2
0.1389
p.E16D
DO229027
LICA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.1389
p.F12L
DO233737
GACA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.25
p.L11F
DO229015
LICA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.2778
p.L7F
DO52319
LIHC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.6981
p.Y18N
DO45345
LUAD
ICGC
SKENI
DEG_APCC_KENBOX_2
0.0833
p.G2V
DO45450
LUSC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.6944
p.A9G
DO27279
LUSC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.754
p.G2E
DO222731
MELA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.6944
p.C13Y
DO33432
PACA
ICGC
SKENI
DEG_APCC_KENBOX_2
0.2222
p.F13L
DO36556
READ
ICGC
SKENI
DEG_APCC_KENBOX_2
0.2222
p.G2R
DO220056
SARC
ICGC
SKENI
DEG_APCC_KENBOX_2
0.6944
p.G4E
DO50301
SKCM
ICGC
SKENI
DEG_APCC_KENBOX_2
0.4167
p.G4R
DO48665
SKCM
ICGC
SKENI
DEG_APCC_KENBOX_2
0.4167
p.Q17H
NEC8
testis
COSMIC
SKENI
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with SLCO1C1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13521
Secretogranin-2
DEG_APCC_KENBOX_2
268:272
SKENI
APC,CDC20,FZR1
0.7451
More...
P51955
Serine/threonine-protein kinase Nek2
DEG_APCC_KENBOX_2
390:394
SKENI
APC,CDC20,FZR1
0.9566
More...
Q9NQ76
Matrix extracellular phosphoglycoprotein
DEG_APCC_KENBOX_2
60:64
SKENI
APC,CDC20,FZR1
0.9125
More...
Q9NQX3
Gephyrin [Includes: Molybdopterin adenylyltransferase
DEG_APCC_KENBOX_2
295:299
SKENI
APC,CDC20,FZR1
0.8364
More...
Q9NSY1
BMP-2-inducible protein kinase
DEG_APCC_KENBOX_2
1041:1045
SKENI
APC,CDC20,FZR1
0.9065
More...
Q9NYB5
Solute carrier organic anion transporter family member 1C1
DEG_APCC_KENBOX_2
5:9
SKENI
APC,CDC20,FZR1
0.9756
More...