DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VASTT
Uniprot ID:
Q86V86
Source protein:
Serine/threonine-protein kinase pim-3
Source gene:
PIM3
Class:
DEG_SPOP_SBC_1
Location:
316:320
E3 ligase:
SPOP
DEGRON score:
0.7149
ASA_SCORE:
80.14
COIL:
0.8278
CONS_SCORE:
0.4109
DSS_SCORE:
0.5562
HELIX:
0.1456
FCONS_SCORE:
0.8635
RIG_SCORE:
0.7018
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A317S
DO229018
LICA
ICGC
VASTT
DEG_SPOP_SBC_1
0.6477
p.S325I
DO50657
ORCA
ICGC
VASTT
DEG_SPOP_SBC_1
0.1944
p.R307L
DO229213
THCA
ICGC
VASTT
DEG_SPOP_SBC_1
0.0833
p.P313S
SIDM01092
B-Cell Non-Hodgkin's Lymphoma
GDSC
VASTT
DEG_SPOP_SBC_1
0.25
p.S322T
SIDM00145
T-Lymphoblastic Leukemia
GDSC
VASTT
DEG_SPOP_SBC_1
0.2778
p.S322T
ACH-001127
Leukemia
CCLE
VASTT
DEG_SPOP_SBC_1
0.2778
p.S322T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
VASTT
DEG_SPOP_SBC_1
0.2778
p.D315N
ACH-000997
Colon/Colorectal Cancer
CCLE
VASTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with PIM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00145
ALL|lymphoblastic_leukemia
p.A288T (No)
GDSC
PI-103
0.1685
SIDM00145
ALL|lymphoblastic_leukemia
p.A288T (No)
GDSC
SL0101
23.8619
SIDM00145
ALL|lymphoblastic_leukemia
p.A288T (No)
GDSC
AZD1208
10.0056
SIDM00145
ALL|lymphoblastic_leukemia
p.A288T (No)
GDSC
AZD1208
116.94
SIDM00145
ALL|lymphoblastic_leukemia
p.S322T (Yes)
GDSC
PI-103
0.1685
SIDM00145
ALL|lymphoblastic_leukemia
p.S322T (Yes)
GDSC
SL0101
23.8619
SIDM00145
ALL|lymphoblastic_leukemia
p.S322T (Yes)
GDSC
AZD1208
10.0056
SIDM00145
ALL|lymphoblastic_leukemia
p.S322T (Yes)
GDSC
AZD1208
116.94
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.V239M (No)
GDSC
PI-103
0.0286
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.V239M (No)
GDSC
SL0101
55.0356
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.V239M (No)
GDSC
AZD1208
49.0196
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.V239M (No)
GDSC
AZD1208
114.01
SIDM01092
STAD|stomach
p.P313S (Yes)
GDSC
PI-103
0.1945
SIDM01092
STAD|stomach
p.P313S (Yes)
GDSC
SL0101
44.8441
SIDM01092
STAD|stomach
p.P313S (Yes)
GDSC
AZD1208
150.5283
SIDM01092
STAD|stomach
p.P313S (Yes)
GDSC
AZD1208
195.72
SIDM00951
LAML|acute_myeloid_leukaemia
p.G16fs*8 (No)
GDSC
PI-103
1.081
SIDM00951
LAML|acute_myeloid_leukaemia
p.G16fs*8 (No)
GDSC
SL0101
39.8103
SIDM00951
LAML|acute_myeloid_leukaemia
p.G16fs*8 (No)
GDSC
AZD1208
4.1113
SIDM00951
LAML|acute_myeloid_leukaemia
p.G16fs*8 (No)
GDSC
AZD1208
25.439
All proteins holding degron of VASTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15083
ERC protein 2
DEG_SPOP_SBC_1
70:74
VASTT
SPOP
0.9875
More...
O95274
Ly6/PLAUR domain-containing protein 3
DEG_SPOP_SBC_1
249:253
VASTT
SPOP
0.9553
More...
P15144
Aminopeptidase N
DEG_SPOP_SBC_1
46:50
VASTT
SPOP
0.7621
More...
Q14CZ8
Hepatocyte cell adhesion molecule
DEG_SPOP_SBC_1
152:156
VASTT
SPOP
0.6335
More...
Q86V86
Serine/threonine-protein kinase pim-3
DEG_SPOP_SBC_1
316:320
VASTT
SPOP
0.7149
More...
Q9Y467
Sal-like protein 2
DEG_SPOP_SBC_1
478:482
VASTT
SPOP
0.6062
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
129:133
VASTT
SPOP
0.8725
More...