DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VFSTS
Uniprot ID:
Q9UMZ2
Source protein:
Synergin gamma
Source gene:
SYNRG
Class:
DEG_SPOP_SBC_1
Location:
636:640
E3 ligase:
SPOP
DEGRON score:
0.9936
ASA_SCORE:
75.16
COIL:
0.7896
CONS_SCORE:
0.3417
DSS_SCORE:
0.3105
HELIX:
0.1174
FCONS_SCORE:
0.9784
RIG_SCORE:
0.7248
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E638K
DO219909
DLBC
ICGC
VFSTS
DEG_SPOP_SBC_1
0.7022
p.K641E
SIDM00329
Hodgkin's Lymphoma
GDSC
VFSTS
DEG_SPOP_SBC_1
0.3056
p.D635N
ACH-002029
Head and Neck Cancer
CCLE
VFSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SYNRG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P31274
Homeobox protein Hox-C9
DEG_SPOP_SBC_1
61:65
VFSTS
SPOP
0.5518
More...
Q12923
Tyrosine-protein phosphatase non-receptor type 13
DEG_SPOP_SBC_1
411:415
VFSTS
SPOP
0.5201
More...
Q5JUK3
Potassium channel subfamily T member 1
DEG_SPOP_SBC_1
1028:1032
VFSTS
SPOP
0.9188
More...
Q7LBC6
Lysine-specific demethylase 3B
DEG_SPOP_SBC_1
1318:1322
VFSTS
SPOP
0.9967
More...
Q99594
Transcriptional enhancer factor TEF-5
DEG_SPOP_SBC_1
154:158
VFSTS
SPOP
0.9993
More...
Q9UMZ2
Synergin gamma
DEG_SPOP_SBC_1
636:640
VFSTS
SPOP
0.9936
More...