DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VGSTS
Uniprot ID:
Q86SJ6
Source protein:
Desmoglein-4
Source gene:
DSG4
Class:
DEG_SPOP_SBC_1
Location:
1017:1021
E3 ligase:
SPOP
DEGRON score:
0.9979
ASA_SCORE:
78.54
COIL:
0.7678
CONS_SCORE:
0.4458
DSS_SCORE:
0.614
HELIX:
0.0224
FCONS_SCORE:
1.1587
RIG_SCORE:
0.6417
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1018S
TCGA-55-8092
LUAD
TCGA
VGSTS
DEG_SPOP_SBC_1
0.6752
p.P1018S
DO26220
LUAD
ICGC
VGSTS
DEG_SPOP_SBC_1
0.6752
p.Q1024K
TCGA-61-1895
OV
TCGA
VGSTS
DEG_SPOP_SBC_1
0.25
p.Q1024K
DO30020
OV
ICGC
VGSTS
DEG_SPOP_SBC_1
0.25
p.G1017R
TCGA-73-4670
LUAD
TCGA
VGSTS
DEG_SPOP_SBC_1
0.7568
p.G1017R
TCGA-DR-A0ZM
CESC
TCGA
VGSTS
DEG_SPOP_SBC_1
0.7568
p.G1017R
DO6254
CESC
ICGC
VGSTS
DEG_SPOP_SBC_1
0.7568
p.G1017R
DO25350
LUAD
ICGC
VGSTS
DEG_SPOP_SBC_1
0.7568
p.M1026I
TCGA-95-7947
LUAD
TCGA
VGSTS
DEG_SPOP_SBC_1
0.1944
p.M1026I
DO26404
LUAD
ICGC
VGSTS
DEG_SPOP_SBC_1
0.1944
p.P1028T
TCGA-AP-A059
UCEC
TCGA
VGSTS
DEG_SPOP_SBC_1
0.1389
p.P1028T
DO41361
UCEC
ICGC
VGSTS
DEG_SPOP_SBC_1
0.1389
p.M1026T
TCGA-AX-A2HG
UCEC
TCGA
VGSTS
DEG_SPOP_SBC_1
0.1944
p.M1026T
DO41337
UCEC
ICGC
VGSTS
DEG_SPOP_SBC_1
0.1944
p.M1025I
TCGA-CA-6718
COAD
TCGA
VGSTS
DEG_SPOP_SBC_1
0.2222
p.M1025I
DO7801
COAD
ICGC
VGSTS
DEG_SPOP_SBC_1
0.2222
p.M1025I
DO222415
MELA
ICGC
VGSTS
DEG_SPOP_SBC_1
0.2222
p.G1007E
TCGA-WE-A8ZO
SKCM
TCGA
VGSTS
DEG_SPOP_SBC_1
0.0556
p.G1007E
DO51286
SKCM
ICGC
VGSTS
DEG_SPOP_SBC_1
0.0556
p.V1009L
DO229018
LICA
ICGC
VGSTS
DEG_SPOP_SBC_1
0.1111
p.P1031S
SIDM00683
Prostate Carcinoma
GDSC
VGSTS
DEG_SPOP_SBC_1
0.0556
p.P1031S
LNCaP-Clone-FGC
prostate
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.0556
p.R1031Q
ACH-000225
Gastric Cancer
CCLE
VGSTS
DEG_SPOP_SBC_1
0.0556
p.R1031Q
ACH-000999
Colon/Colorectal Cancer
CCLE
VGSTS
DEG_SPOP_SBC_1
0.0556
p.R1031Q
SNU-1040
large_intestine
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.0556
p.R1031Q
ECC12
stomach
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.0556
p.G1014S
ACH-000899
Skin Cancer
CCLE
VGSTS
DEG_SPOP_SBC_1
0.25
p.P1022S
ACH-000916
Lung Cancer
CCLE
VGSTS
DEG_SPOP_SBC_1
0.3056
p.P1022S
NCI-H1573
lung
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.3056
p.P1012S
ACH-000977
lymph_node
CCLE
VGSTS
DEG_SPOP_SBC_1
0.1944
p.P1012S
LNCaP-Clone-FGC
prostate
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.1944
p.V1029A
ACH-001518
Endometrial/Uterine Cancer
CCLE
VGSTS
DEG_SPOP_SBC_1
0.1111
p.S1008G
ACH-002287
Colon/Colorectal Cancer
CCLE
VGSTS
DEG_SPOP_SBC_1
0.0833
p.S1008G
NCI-H630
large_intestine
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.0833
p.S1027G
NCI-H630
large_intestine
COSMIC
VGSTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with DSG4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15637
Splicing factor 1
DEG_SPOP_SBC_1
329:333
VGSTS
SPOP
0.9983
More...
Q86SJ6
Desmoglein-4
DEG_SPOP_SBC_1
1017:1021
VGSTS
SPOP
0.9979
More...
Q99569
Plakophilin-4
DEG_SPOP_SBC_1
1043:1047
VGSTS
SPOP
0.9894
More...
Q99640
Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
DEG_SPOP_SBC_1
450:454
VGSTS
SPOP
0.9993
More...
Q8NI99
Angiopoietin-related protein 6
DEG_SPOP_SBC_1
210:214
VGSTS
SPOP
0.5427
More...
Q5T8I3
Protein FAM102B
DEG_SPOP_SBC_1
240:244
VGSTS
SPOP
0.9943
More...